RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
CDCA4P4-201ENST00000435216 GNPATO15228 680 aa17.88■□□□□ 0.45
CDCA4P4-201ENST00000435216 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
CDCA4P4-201ENST00000435216 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
CDCA4P4-201ENST00000435216 YBX3P16989 372 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDCA4P4-201ENST00000435216 HMGB2P26583 209 aaKnown RBP17.87■□□□□ 0.45
CDCA4P4-201ENST00000435216 DCAF5Q96JK2 942 aa17.87■□□□□ 0.45
CDCA4P4-201ENST00000435216 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
CDCA4P4-201ENST00000435216 SLC4A9Q96Q91 983 aa17.86■□□□□ 0.45
CDCA4P4-201ENST00000435216 PLEKHG2Q9H7P9 1386 aa17.86■□□□□ 0.45
CDCA4P4-201ENST00000435216 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 SSFA2P28290 1259 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 IL13P35225 146 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 KDRP35968 1356 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 CABP4P57796 275 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 AMOTQ4VCS5 1084 aa17.85■□□□□ 0.45
CDCA4P4-201ENST00000435216 MTHFSP49914 203 aa17.84■□□□□ 0.45
CDCA4P4-201ENST00000435216 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
CDCA4P4-201ENST00000435216 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
CDCA4P4-201ENST00000435216 WWC3Q9ULE0 1092 aa17.83■□□□□ 0.44
CDCA4P4-201ENST00000435216 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P4-201ENST00000435216 PER1O15534 1290 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P4-201ENST00000435216 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
CDCA4P4-201ENST00000435216 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
CDCA4P4-201ENST00000435216 HMOX1P09601 288 aa17.81■□□□□ 0.44
CDCA4P4-201ENST00000435216 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
CDCA4P4-201ENST00000435216 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
CDCA4P4-201ENST00000435216 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
CDCA4P4-201ENST00000435216 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
CDCA4P4-201ENST00000435216 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
CDCA4P4-201ENST00000435216 TRAPPC3LQ5T215 181 aa17.78■□□□□ 0.44
CDCA4P4-201ENST00000435216 MYH14Q7Z406 1995 aaKnown RBP17.77■□□□□ 0.44
CDCA4P4-201ENST00000435216 MMP10P09238 476 aa17.77■□□□□ 0.44
CDCA4P4-201ENST00000435216 TJP1Q07157 1748 aa17.76■□□□□ 0.43
CDCA4P4-201ENST00000435216 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
CDCA4P4-201ENST00000435216 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
CDCA4P4-201ENST00000435216 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 CNTNAP4Q9C0A0 1308 aa17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 CICQ96RK0 1608 aaPredicted RBP17.75■□□□□ 0.43
CDCA4P4-201ENST00000435216 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
CDCA4P4-201ENST00000435216 RFC4P35249 363 aa17.73■□□□□ 0.43
CDCA4P4-201ENST00000435216 CRKLP46109 303 aaKnown RBP17.73■□□□□ 0.43
CDCA4P4-201ENST00000435216 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
CDCA4P4-201ENST00000435216 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
CDCA4P4-201ENST00000435216 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
CDCA4P4-201ENST00000435216 GYS1P13807 737 aa17.72■□□□□ 0.43
CDCA4P4-201ENST00000435216 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
CDCA4P4-201ENST00000435216 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
CDCA4P4-201ENST00000435216 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.43
CDCA4P4-201ENST00000435216 ADRA2BP18089 450 aa17.71■□□□□ 0.43
CDCA4P4-201ENST00000435216 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
CDCA4P4-201ENST00000435216 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
CDCA4P4-201ENST00000435216 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
CDCA4P4-201ENST00000435216 MRC1P22897 1456 aa17.7■□□□□ 0.42
CDCA4P4-201ENST00000435216 U2SURPO15042 1029 aaKnown RBP17.7■□□□□ 0.42
CDCA4P4-201ENST00000435216 C1QTNF8P60827 252 aa17.7■□□□□ 0.42
CDCA4P4-201ENST00000435216 DNAJC10Q8IXB1 793 aa17.7■□□□□ 0.42
CDCA4P4-201ENST00000435216 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
CDCA4P4-201ENST00000435216 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
CDCA4P4-201ENST00000435216 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
CDCA4P4-201ENST00000435216 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
CDCA4P4-201ENST00000435216 NPC1L1Q9UHC9 1359 aa17.68■□□□□ 0.42
CDCA4P4-201ENST00000435216 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
CDCA4P4-201ENST00000435216 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
CDCA4P4-201ENST00000435216 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
CDCA4P4-201ENST00000435216 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
CDCA4P4-201ENST00000435216 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
CDCA4P4-201ENST00000435216 FKBP8Q14318 412 aa17.67■□□□□ 0.42
CDCA4P4-201ENST00000435216 PARP3Q9Y6F1 533 aa17.67■□□□□ 0.42
CDCA4P4-201ENST00000435216 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
CDCA4P4-201ENST00000435216 SENP3-EIF4A1A0A087X0R7 540 aa17.66■□□□□ 0.42
CDCA4P4-201ENST00000435216 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
CDCA4P4-201ENST00000435216 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
CDCA4P4-201ENST00000435216 BCS1LQ9Y276 419 aa17.65■□□□□ 0.42
CDCA4P4-201ENST00000435216 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
CDCA4P4-201ENST00000435216 DPEP1P16444 411 aa17.64■□□□□ 0.41
CDCA4P4-201ENST00000435216 TGFB2P61812 414 aa17.64■□□□□ 0.41
CDCA4P4-201ENST00000435216 DDR1Q08345 913 aa17.64■□□□□ 0.41
CDCA4P4-201ENST00000435216 ADCY9O60503 1353 aa17.64■□□□□ 0.41
CDCA4P4-201ENST00000435216 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
CDCA4P4-201ENST00000435216 USPL1Q5W0Q7 1092 aa17.62■□□□□ 0.41
CDCA4P4-201ENST00000435216 IL17REQ8NFR9 667 aa17.62■□□□□ 0.41
CDCA4P4-201ENST00000435216 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
CDCA4P4-201ENST00000435216 SOS1Q07889 1333 aaPredicted RBP17.62■□□□□ 0.41
CDCA4P4-201ENST00000435216 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
CDCA4P4-201ENST00000435216 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
CDCA4P4-201ENST00000435216 ZPR1O75312 459 aa17.61■□□□□ 0.41
CDCA4P4-201ENST00000435216 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
CDCA4P4-201ENST00000435216 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
CDCA4P4-201ENST00000435216 FCHSD2O94868 740 aa17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 TEFQ10587 303 aa17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms