RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 KDRP35968 1356 aa29.77■■■□□ 2.36
RPUSD3-206ENST00000433535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.76■■■□□ 2.35
RPUSD3-206ENST00000433535 ATP6V1AP38606 617 aa29.76■■■□□ 2.35
RPUSD3-206ENST00000433535 DCAF5Q96JK2 942 aa29.75■■■□□ 2.35
RPUSD3-206ENST00000433535 HSP90AB1P08238 724 aaKnown RBP29.74■■■□□ 2.35
RPUSD3-206ENST00000433535 SULT6B1Q6IMI4 303 aa29.74■■■□□ 2.35
RPUSD3-206ENST00000433535 ZNF784Q8NCA9 323 aaPredicted RBP29.74■■■□□ 2.35
RPUSD3-206ENST00000433535 ERVV-2B6SEH9 535 aa29.73■■■□□ 2.35
RPUSD3-206ENST00000433535 GNPATO15228 680 aa29.73■■■□□ 2.35
RPUSD3-206ENST00000433535 IL13P35225 146 aa29.73■■■□□ 2.35
RPUSD3-206ENST00000433535 AMOTQ4VCS5 1084 aa29.73■■■□□ 2.35
RPUSD3-206ENST00000433535 SSFA2P28290 1259 aa29.72■■■□□ 2.35
RPUSD3-206ENST00000433535 ZNF831Q5JPB2 1677 aa29.7■■■□□ 2.35
RPUSD3-206ENST00000433535 COL5A3P25940 1745 aaPredicted RBP29.7■■■□□ 2.34
RPUSD3-206ENST00000433535 CABP4P57796 275 aa29.69■■■□□ 2.34
RPUSD3-206ENST00000433535 C1orf141Q5JVX7 400 aa29.69■■■□□ 2.34
RPUSD3-206ENST00000433535 SLC4A9Q96Q91 983 aa29.69■■■□□ 2.34
RPUSD3-206ENST00000433535 RBM42Q9BTD8 480 aaKnown RBP29.69■■■□□ 2.34
RPUSD3-206ENST00000433535 YBX3P16989 372 aaKnown RBP eCLIP29.68■■■□□ 2.347e-7■■□□□ 12.7
RPUSD3-206ENST00000433535 CC2D1BQ5T0F9 858 aaKnown RBP29.68■■■□□ 2.34
RPUSD3-206ENST00000433535 PER1O15534 1290 aaPredicted RBP29.67■■■□□ 2.34
RPUSD3-206ENST00000433535 MTHFSP49914 203 aa29.67■■■□□ 2.34
RPUSD3-206ENST00000433535 SCN11AQ9UI33 1791 aa29.66■■■□□ 2.34
RPUSD3-206ENST00000433535 CD2APQ9Y5K6 639 aa29.65■■■□□ 2.34
RPUSD3-206ENST00000433535 HMOX1P09601 288 aa29.61■■■□□ 2.33
RPUSD3-206ENST00000433535 CNGB1Q14028 1251 aaPredicted RBP29.61■■■□□ 2.33
RPUSD3-206ENST00000433535 NFATC2IPQ8NCF5 419 aa29.6■■■□□ 2.33
RPUSD3-206ENST00000433535 GOLGB1Q14789 3259 aaKnown RBP29.6■■■□□ 2.33
RPUSD3-206ENST00000433535 TJP1Q07157 1748 aa29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 PTCD1O75127 700 aaKnown RBP29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 RTCBQ9Y3I0 505 aaKnown RBP29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 CNTNAP4Q9C0A0 1308 aa29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 C4AP0C0L4 1744 aa29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 MYH14Q7Z406 1995 aaKnown RBP29.59■■■□□ 2.33
RPUSD3-206ENST00000433535 VIRMAQ69YN4 1812 aaKnown RBP29.58■■■□□ 2.33
RPUSD3-206ENST00000433535 GRIN3BO60391 1043 aa29.57■■■□□ 2.32
RPUSD3-206ENST00000433535 CICQ96RK0 1608 aaPredicted RBP29.56■■■□□ 2.32
RPUSD3-206ENST00000433535 AKAP4Q5JQC9 854 aa29.56■■■□□ 2.32
RPUSD3-206ENST00000433535 TRAPPC3LQ5T215 181 aa29.56■■■□□ 2.32
RPUSD3-206ENST00000433535 WWC3Q9ULE0 1092 aa29.56■■■□□ 2.32
RPUSD3-206ENST00000433535 COL3A1P02461 1466 aaPredicted RBP29.55■■■□□ 2.32
RPUSD3-206ENST00000433535 DIAPH1O60610 1272 aaKnown RBP29.55■■■□□ 2.32
RPUSD3-206ENST00000433535 RC3H1Q5TC82 1133 aaKnown RBP29.55■■■□□ 2.32
RPUSD3-206ENST00000433535 MRC1P22897 1456 aa29.55■■■□□ 2.32
RPUSD3-206ENST00000433535 MMP10P09238 476 aa29.54■■■□□ 2.32
RPUSD3-206ENST00000433535 NPC1L1Q9UHC9 1359 aa29.53■■■□□ 2.32
RPUSD3-206ENST00000433535 ARHGEF1Q92888 912 aaKnown RBP29.53■■■□□ 2.32
RPUSD3-206ENST00000433535 ADRA2BP18089 450 aa29.52■■■□□ 2.32
RPUSD3-206ENST00000433535 LGR6Q9HBX8 967 aa29.52■■■□□ 2.32
RPUSD3-206ENST00000433535 RPS6KA4O75676 772 aa29.51■■■□□ 2.31
RPUSD3-206ENST00000433535 ADAMTS7Q9UKP4 1686 aa29.5■■■□□ 2.31
RPUSD3-206ENST00000433535 CRKLP46109 303 aaKnown RBP29.5■■■□□ 2.31
RPUSD3-206ENST00000433535 SLC52A2Q9HAB3 445 aa29.5■■■□□ 2.31
RPUSD3-206ENST00000433535 KIF13BQ9NQT8 1826 aa29.5■■■□□ 2.31
RPUSD3-206ENST00000433535 KIAA1551Q9HCM1 1747 aa29.49■■■□□ 2.31
RPUSD3-206ENST00000433535 MTHFSDQ2M296 383 aaKnown RBP29.49■■■□□ 2.31
RPUSD3-206ENST00000433535 RNMTO43148 476 aaKnown RBP29.48■■■□□ 2.31
RPUSD3-206ENST00000433535 RFC4P35249 363 aa29.48■■■□□ 2.31
RPUSD3-206ENST00000433535 GYS1P13807 737 aa29.47■■■□□ 2.31
RPUSD3-206ENST00000433535 NLGN1Q8N2Q7 840 aa29.47■■■□□ 2.31
RPUSD3-206ENST00000433535 PXDNLA1KZ92 1463 aa29.46■■■□□ 2.31
RPUSD3-206ENST00000433535 N4BP2Q86UW6 1770 aaPredicted RBP29.46■■■□□ 2.31
RPUSD3-206ENST00000433535 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.31
RPUSD3-206ENST00000433535 KCPQ6ZWJ8 1503 aa29.45■■■□□ 2.31
RPUSD3-206ENST00000433535 SLC39A6Q13433 755 aa29.45■■■□□ 2.31
RPUSD3-206ENST00000433535 U2SURPO15042 1029 aaKnown RBP29.44■■■□□ 2.3
RPUSD3-206ENST00000433535 DNAJC10Q8IXB1 793 aa29.43■■■□□ 2.3
RPUSD3-206ENST00000433535 SRP68Q9UHB9 627 aaKnown RBP29.43■■■□□ 2.3
RPUSD3-206ENST00000433535 INTS5Q6P9B9 1019 aaKnown RBP29.41■■■□□ 2.3
RPUSD3-206ENST00000433535 ATP10DQ9P241 1426 aa29.41■■■□□ 2.3
RPUSD3-206ENST00000433535 UBR2Q8IWV8 1755 aa29.4■■■□□ 2.3
RPUSD3-206ENST00000433535 USP42Q9H9J4 1324 aaKnown RBP29.4■■■□□ 2.3
RPUSD3-206ENST00000433535 GIGYF1O75420 1035 aaPredicted RBP29.39■■■□□ 2.3
RPUSD3-206ENST00000433535 C1QTNF8P60827 252 aa29.39■■■□□ 2.3
RPUSD3-206ENST00000433535 PARP3Q9Y6F1 533 aa29.39■■■□□ 2.3
RPUSD3-206ENST00000433535 CCDC87Q9NVE4 849 aa29.38■■■□□ 2.29
RPUSD3-206ENST00000433535 FKBP8Q14318 412 aa29.37■■■□□ 2.29
RPUSD3-206ENST00000433535 ADCY9O60503 1353 aa29.37■■■□□ 2.29
RPUSD3-206ENST00000433535 A0A0G2JLW4 131 aa29.35■■■□□ 2.29
RPUSD3-206ENST00000433535 CYP19A1P11511 503 aaPredicted RBP29.35■■■□□ 2.29
RPUSD3-206ENST00000433535 SOS1Q07889 1333 aaPredicted RBP29.35■■■□□ 2.29
RPUSD3-206ENST00000433535 TGFB2P61812 414 aa29.34■■■□□ 2.29
RPUSD3-206ENST00000433535 SIPA1L3O60292 1781 aaPredicted RBP29.34■■■□□ 2.29
RPUSD3-206ENST00000433535 BRCA1P38398 1863 aaKnown RBP29.34■■■□□ 2.29
RPUSD3-206ENST00000433535 DDR1Q08345 913 aa29.33■■■□□ 2.29
RPUSD3-206ENST00000433535 DPEP1P16444 411 aa29.32■■■□□ 2.28
RPUSD3-206ENST00000433535 GAS2L2Q8NHY3 880 aa29.32■■■□□ 2.28
RPUSD3-206ENST00000433535 ZBTB1Q9Y2K1 713 aa29.32■■■□□ 2.28
RPUSD3-206ENST00000433535 CFAP53Q96M91 514 aa29.31■■■□□ 2.28
RPUSD3-206ENST00000433535 BCS1LQ9Y276 419 aa29.31■■■□□ 2.28
RPUSD3-206ENST00000433535 COL15A1P39059 1388 aa29.3■■■□□ 2.28
RPUSD3-206ENST00000433535 SENP3-EIF4A1A0A087X0R7 540 aa29.3■■■□□ 2.28
RPUSD3-206ENST00000433535 GNAT3A8MTJ3 354 aa29.3■■■□□ 2.28
RPUSD3-206ENST00000433535 IL17REQ8NFR9 667 aa29.3■■■□□ 2.28
RPUSD3-206ENST00000433535 PRKAR2BP31323 418 aa29.29■■■□□ 2.28
RPUSD3-206ENST00000433535 USPL1Q5W0Q7 1092 aa29.29■■■□□ 2.28
RPUSD3-206ENST00000433535 TTC5Q8N0Z6 440 aa29.29■■■□□ 2.28
RPUSD3-206ENST00000433535 ZNF526Q8TF50 670 aaPredicted RBP29.29■■■□□ 2.28
RPUSD3-206ENST00000433535 ZPR1O75312 459 aa29.28■■■□□ 2.28
RPUSD3-206ENST00000433535 PPP2R1AP30153 589 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms