RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
DDX56-204ENST00000431640 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
DDX56-204ENST00000431640 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
DDX56-204ENST00000431640 NLRP2Q9NX02 1062 aa16.21■□□□□ 0.19
DDX56-204ENST00000431640 DCTN1Q14203 1278 aa16.21■□□□□ 0.18
DDX56-204ENST00000431640 DISP2A7MBM2 1401 aa16.2■□□□□ 0.18
DDX56-204ENST00000431640 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
DDX56-204ENST00000431640 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
DDX56-204ENST00000431640 SMC5Q8IY18 1101 aa16.2■□□□□ 0.18
DDX56-204ENST00000431640 ZBTB7BO15156 539 aaPredicted RBP16.19■□□□□ 0.18
DDX56-204ENST00000431640 GLI3P10071 1580 aa16.19■□□□□ 0.18
DDX56-204ENST00000431640 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
DDX56-204ENST00000431640 MTHFSDQ2M296 383 aaKnown RBP16.18■□□□□ 0.18
DDX56-204ENST00000431640 FNBP4Q8N3X1 1017 aaPredicted RBP16.18■□□□□ 0.18
DDX56-204ENST00000431640 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
DDX56-204ENST00000431640 ABCC4O15439 1325 aa16.18■□□□□ 0.18
DDX56-204ENST00000431640 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
DDX56-204ENST00000431640 MCM10Q7L590 875 aa16.17■□□□□ 0.18
DDX56-204ENST00000431640 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
DDX56-204ENST00000431640 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
DDX56-204ENST00000431640 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
DDX56-204ENST00000431640 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
DDX56-204ENST00000431640 ADAMTS7Q9UKP4 1686 aa16.16■□□□□ 0.18
DDX56-204ENST00000431640 AFF2P51816 1311 aa16.16■□□□□ 0.18
DDX56-204ENST00000431640 EVA1CP58658 441 aa16.15■□□□□ 0.18
DDX56-204ENST00000431640 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
DDX56-204ENST00000431640 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
DDX56-204ENST00000431640 PTPRCP08575 1304 aa16.15■□□□□ 0.18
DDX56-204ENST00000431640 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
DDX56-204ENST00000431640 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
DDX56-204ENST00000431640 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
DDX56-204ENST00000431640 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 ATRNO75882 1429 aa16.14■□□□□ 0.17
DDX56-204ENST00000431640 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
DDX56-204ENST00000431640 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
DDX56-204ENST00000431640 NUCB1Q02818 461 aa16.13■□□□□ 0.17
DDX56-204ENST00000431640 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
DDX56-204ENST00000431640 TOGARAM1Q9Y4F4 1720 aa16.12■□□□□ 0.17
DDX56-204ENST00000431640 USP21Q9UK80 565 aa16.12■□□□□ 0.17
DDX56-204ENST00000431640 VPS72Q15906 364 aa16.1■□□□□ 0.17
DDX56-204ENST00000431640 PLEKHG2Q9H7P9 1386 aa16.1■□□□□ 0.17
DDX56-204ENST00000431640 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
DDX56-204ENST00000431640 TNS2Q63HR2 1409 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 CHD1LQ86WJ1 897 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 RAPGEF4Q8WZA2 1011 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 SIPA1L3O60292 1781 aaPredicted RBP16.09■□□□□ 0.17
DDX56-204ENST00000431640 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 IL2RBP14784 551 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
DDX56-204ENST00000431640 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
DDX56-204ENST00000431640 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
DDX56-204ENST00000431640 CYP27B1O15528 508 aa16.08■□□□□ 0.16
DDX56-204ENST00000431640 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
DDX56-204ENST00000431640 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
DDX56-204ENST00000431640 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
DDX56-204ENST00000431640 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
DDX56-204ENST00000431640 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
DDX56-204ENST00000431640 CEMIPQ8WUJ3 1361 aa16.06■□□□□ 0.16
DDX56-204ENST00000431640 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
DDX56-204ENST00000431640 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
DDX56-204ENST00000431640 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
DDX56-204ENST00000431640 CCDC9Q9Y3X0 531 aaKnown RBP16.05■□□□□ 0.16
DDX56-204ENST00000431640 MRC1P22897 1456 aa16.05■□□□□ 0.16
DDX56-204ENST00000431640 SEC24BO95487 1268 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 PHKG2P15735 406 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 BECN1Q14457 450 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 BARGINQ6ZT62 677 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 ILDR1Q86SU0 546 aaPredicted RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 EIF5BO60841 1220 aaKnown RBP16.04■□□□□ 0.16
DDX56-204ENST00000431640 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
DDX56-204ENST00000431640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■□□□□ 10.5
DDX56-204ENST00000431640 KDM3BQ7LBC6 1761 aa16.03■□□□□ 0.16
DDX56-204ENST00000431640 AKAP4Q5JQC9 854 aa16.03■□□□□ 0.16
DDX56-204ENST00000431640 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
DDX56-204ENST00000431640 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
DDX56-204ENST00000431640 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 RGS12O14924 1447 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
DDX56-204ENST00000431640 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 ANKRD44Q8N8A2 993 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 GJD4Q96KN9 370 aaPredicted RBP16.02■□□□□ 0.16
DDX56-204ENST00000431640 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 LNPKQ9C0E8 428 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms