RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FOXD4L4Q8WXT5 416 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 RBM19Q9Y4C8 960 aaKnown RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 A0A0G2JS52 829 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 BACH1O14867 736 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 PTCD1O75127 700 aaKnown RBP5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARID5BQ14865 1188 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 Q6ZVU0 165 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 XAGE2Q96GT9 111 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 SEPT3Q9UH03 358 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 IQSEC3Q9UPP2 1182 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
HMGB1P27-201ENST00000431429 GDF9O60383 454 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 LGR5O75473 907 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 IL2RAP01589 272 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 ERCC3P19447 782 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 TNS4Q8IZW8 715 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 HINFPQ9BQA5 517 aa5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 TSPAN10Q9H1Z9 355 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 SCHIP1Q9P0W5 487 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 DNMT3AQ9Y6K1 912 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 V9GY48 417 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P27-201ENST00000431429 A0A1W2PRU2 124 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ADH1AP07327 375 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 SMTNP53814 917 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARHGAP4P98171 946 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 NNTQ13423 1086 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF697Q5TEC3 545 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 GTF3C2Q8WUA4 911 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 C2orf49Q9BVC5 232 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 FHDC1Q9C0D6 1143 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 PGPEP1Q9NXJ5 209 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 USP3Q9Y6I4 520 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 ATAD2Q6PL18 1390 aa5.49□□□□□ -1.53
HMGB1P27-201ENST00000431429 RBM47A0AV96 593 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 A6NJY4 79 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 HIRAP54198 1017 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF211Q13398 564 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 SF3B2Q13435 895 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ESCO1Q5FWF5 840 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 SNIP1Q8TAD8 396 aaKnown RBP5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 HELQQ8TDG4 1101 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF428Q96B54 188 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 TOR4AQ9NXH8 423 aa5.48□□□□□ -1.53
HMGB1P27-201ENST00000431429 CDK2AP1O14519 115 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 CLN3Q13286 438 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 TRIM67Q6ZTA4 783 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 NPAS4Q8IUM7 802 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 SCG3Q8WXD2 468 aaKnown RBP5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 MYO19Q96H55 970 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 ARHGEF10LQ9HCE6 1279 aa5.47□□□□□ -1.53
HMGB1P27-201ENST00000431429 H3BRB1 525 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 ALDH1A1P00352 501 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TIMP2P16035 220 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20EP86478 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20CP86479 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20DP86480 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20BP86481 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRR20AP86496 221 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 SLC9A9Q8IVB4 645 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 MKNK1Q9BUB5 465 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 TUT1Q9H6E5 874 aaKnown RBP5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 RAB6BQ9NRW1 208 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 SERTAD1Q9UHV2 236 aa5.46□□□□□ -1.54
HMGB1P27-201ENST00000431429 J3QL48 77 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 EML1O00423 815 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 SMPD1P17405 629 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PTGIRP43119 386 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 RANGAP1P46060 587 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 MARSP56192 900 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PSMA6P60900 246 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 CBLBQ13191 982 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 TEAD4Q15561 434 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZDHHC1Q8WTX9 485 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 CNKSR1Q969H4 720 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 PRKD2Q9BZL6 878 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 SAP130Q9H0E3 1048 aa5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 QTRT2Q9H974 415 aaKnown RBP5.45□□□□□ -1.54
HMGB1P27-201ENST00000431429 UNCXA6NJT0 531 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ABL1P00519 1130 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 IGHA2P01877 340 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 MTMR3Q13615 1198 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PPARGC1BQ86YN6 1023 aaKnown RBP5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 GLYCTKQ8IVS8 523 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 MEIOBQ8N635 442 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ESF1Q9H501 851 aaKnown RBP5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZFAND3Q9H8U3 227 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 ANO2Q9NQ90 1003 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 IGSF5Q9NSI5 407 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PLA2G2EQ9NZK7 142 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 DCTN4Q9UJW0 460 aa5.44□□□□□ -1.54
HMGB1P27-201ENST00000431429 PPP1R12BO60237 982 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZIC2O95409 532 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 CENPCQ03188 943 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 NAA30Q147X3 362 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 COL19A1Q14993 1142 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms