RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 LRRC45Q96CN5 670 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 NEMFO60524 1076 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 CCDC96Q2M329 555 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
RIF1-204ENST00000430328 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 YEATS4O95619 227 aa19.06■□□□□ 0.64
RIF1-204ENST00000430328 TDRD12Q587J7 1177 aaKnown RBP19.06■□□□□ 0.64
RIF1-204ENST00000430328 SEPT10Q9P0V9 454 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 BLOC1S2Q6QNY1 142 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 SPDYE4A6NLX3 237 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 KLHL10Q6JEL2 608 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 CNNM1Q9NRU3 951 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 CLIP2Q9UDT6 1046 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 C16orf45Q96MC5 204 aaPredicted RBP19.05■□□□□ 0.64
RIF1-204ENST00000430328 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
RIF1-204ENST00000430328 CETN1Q12798 172 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
RIF1-204ENST00000430328 GSDMDP57764 484 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 MICALL1Q8N3F8 863 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 STMN4Q9H169 189 aaPredicted RBP19.04■□□□□ 0.64
RIF1-204ENST00000430328 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
RIF1-204ENST00000430328 CCDC110Q8TBZ0 833 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 SMC1BQ8NDV3 1235 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 UBAC1Q9BSL1 405 aa19.04■□□□□ 0.64
RIF1-204ENST00000430328 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 KRT222Q8N1A0 295 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 SRRTQ9BXP5 876 aaKnown RBP19.03■□□□□ 0.64
RIF1-204ENST00000430328 OTUD6BQ8N6M0 293 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 TCHPQ9BT92 498 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 ZMYND15Q9H091 742 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 NOP2P46087 812 aaKnown RBP19.03■□□□□ 0.64
RIF1-204ENST00000430328 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 TTC14Q96N46 770 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 PLVAPQ9BX97 442 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 IFI16Q16666 785 aaKnown RBP19.03■□□□□ 0.64
RIF1-204ENST00000430328 KIAA0753Q2KHM9 967 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 GBP6Q6ZN66 633 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 CCDC121Q6ZUS5 278 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 RSPH14Q9UHP6 348 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 ODF2LQ9ULJ1 636 aa19.03■□□□□ 0.64
RIF1-204ENST00000430328 ARID4AP29374 1257 aaPredicted RBP19.02■□□□□ 0.64
RIF1-204ENST00000430328 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.64
RIF1-204ENST00000430328 JADE2Q9NQC1 790 aa19.02■□□□□ 0.64
RIF1-204ENST00000430328 DNAJC21Q5F1R6 531 aaKnown RBP19.02■□□□□ 0.64
RIF1-204ENST00000430328 CCDC183Q5T5S1 534 aa19.02■□□□□ 0.64
RIF1-204ENST00000430328 ZSCAN31Q96LW9 406 aaPredicted RBP19.02■□□□□ 0.64
RIF1-204ENST00000430328 CAMK4Q16566 473 aa19.02■□□□□ 0.64
RIF1-204ENST00000430328 NDC80O14777 642 aa19.02■□□□□ 0.63
RIF1-204ENST00000430328 GMNNO75496 209 aa19.02■□□□□ 0.63
RIF1-204ENST00000430328 NAA25Q14CX7 972 aa19.02■□□□□ 0.63
RIF1-204ENST00000430328 PAXBP1Q9Y5B6 917 aa19.02■□□□□ 0.63
RIF1-204ENST00000430328 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 TRMT1Q9NXH9 659 aaKnown RBP19.01■□□□□ 0.63
RIF1-204ENST00000430328 GNAI2P04899 355 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 MCM4P33991 863 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 ARFGAP3Q9NP61 516 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 SATB1Q01826 763 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 PSME1Q06323 249 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
RIF1-204ENST00000430328 KRT32Q14532 448 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
RIF1-204ENST00000430328 HMGB1P1B2RPK0 211 aaPredicted RBP19■□□□□ 0.63
RIF1-204ENST00000430328 ATRIPQ8WXE1 791 aa19■□□□□ 0.63
RIF1-204ENST00000430328 EHBP1Q8NDI1 1231 aa19■□□□□ 0.63
RIF1-204ENST00000430328 LUC7L2Q9Y383 392 aaKnown RBP19■□□□□ 0.63
RIF1-204ENST00000430328 A0A1B0GUA9 196 aa19■□□□□ 0.63
RIF1-204ENST00000430328 CTNNA3Q9UI47 895 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
RIF1-204ENST00000430328 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 CTAGE5O15320 804 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 PDRG1Q9NUG6 133 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 TMX1Q9H3N1 280 aa18.99■□□□□ 0.63
RIF1-204ENST00000430328 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
RIF1-204ENST00000430328 USP5P45974 858 aa18.98■□□□□ 0.63
RIF1-204ENST00000430328 SRCIN1Q9C0H9 1055 aa18.98■□□□□ 0.63
RIF1-204ENST00000430328 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
RIF1-204ENST00000430328 KIF20AO95235 890 aa18.98■□□□□ 0.63
RIF1-204ENST00000430328 EPSTI1Q96J88 318 aa18.98■□□□□ 0.63
RIF1-204ENST00000430328 RNF168Q8IYW5 571 aaPredicted RBP18.98■□□□□ 0.63
RIF1-204ENST00000430328 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.639e-6■■■■■ 50.1
RIF1-204ENST00000430328 EBAG9O00559 213 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 CASQ2O14958 399 aaPredicted RBP18.97■□□□□ 0.63
RIF1-204ENST00000430328 OPA1O60313 960 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 UBE2Q2Q8WVN8 375 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 RGS22Q8NE09 1264 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 VCX3BQ9H321 246 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 KIF5AQ12840 1032 aa18.97■□□□□ 0.63
RIF1-204ENST00000430328 STMN1P16949 149 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 PDE1CQ14123 709 aaPredicted RBP18.96■□□□□ 0.63
RIF1-204ENST00000430328 TTC16Q8NEE8 873 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 CCDC63Q8NA47 563 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms