RNA–Protein interactions for RNA: ENST00000429798.1

LIMD1-AS1-202, LIMD1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene LIMD1-AS1, Length 955 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-AS1-202ENST00000429798 THSD7AQ9UPZ6 1657 aa13.39□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 TEFQ10587 303 aa13.38□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 CYP27B1O15528 508 aa13.37□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 MCM10Q7L590 875 aa13.37□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 IL16Q14005 1332 aa13.36□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 E9PSI1 815 aa13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 ONECUT3O60422 494 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 CENPBP07199 599 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 GNAI1P63096 354 aa13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 CABP4P57796 275 aa13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 IFT57Q9NWB7 429 aa13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.27
LIMD1-AS1-202ENST00000429798 KDM6AO15550 1401 aaPredicted RBP13.33□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 IL17REQ8NFR9 667 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 MRC1P22897 1456 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 RGS12O14924 1447 aa13.3□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 SLFN5Q08AF3 891 aa13.29□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 BCL9O00512 1426 aa13.28□□□□□ -0.28
LIMD1-AS1-202ENST00000429798 CHL1O00533 1208 aa13.27□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 ACSBG1Q96GR2 724 aa13.26□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 BRWD3Q6RI45 1802 aa13.25□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 KDM3BQ7LBC6 1761 aa13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 PIGBQ92521 554 aa13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 FMNL2Q96PY5 1086 aa13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 ITGB4P16144 1822 aa13.23□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
LIMD1-AS1-202ENST00000429798 HOXB7P09629 217 aa13.2□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 KCNQ2O43526 872 aa13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 TRIM37O94972 964 aa13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
LIMD1-AS1-202ENST00000429798 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms