RNA–Protein interactions for RNA: ENST00000429798.1

LIMD1-AS1-202, LIMD1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene LIMD1-AS1, Length 955 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-AS1-202ENST00000429798 NIPBLQ6KC79 2804 aaeCLIP7.99□□□□□ -1.131e-9■■■■■ 40.1
LIMD1-AS1-202ENST00000429798 SSBP05455 408 aaKnown RBP eCLIP11.45□□□□□ -0.585e-15■■■■■ 36.5
LIMD1-AS1-202ENST00000429798 NSUN2Q08J23 767 aaKnown RBP eCLIP10.4□□□□□ -0.741e-323■■■■□ 24.9
LIMD1-AS1-202ENST00000429798 XRCC6P12956 609 aaKnown RBP eCLIP11.43□□□□□ -0.584e-73■■■■□ 20.9
LIMD1-AS1-202ENST00000429798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.473e-7■■■■□ 20.1
LIMD1-AS1-202ENST00000429798 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.06□□□□□ -0.647e-19■■■□□ 14.8
LIMD1-AS1-202ENST00000429798 AATFQ9NY61 560 aaKnown RBP eCLIP12.29□□□□□ -0.441e-15■■□□□ 13.2
LIMD1-AS1-202ENST00000429798 SRSF7Q16629 238 aaKnown RBP eCLIP8.49□□□□□ -1.054e-10■■□□□ 12.1
LIMD1-AS1-202ENST00000429798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.36□□□□□ -1.072e-18■■□□□ 12.1
LIMD1-AS1-202ENST00000429798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.112e-30■□□□□ 10.4
LIMD1-AS1-202ENST00000429798 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.691e-323■□□□□ 8.8
LIMD1-AS1-202ENST00000429798 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.371e-323■□□□□ 8.6
Retrieved 12 of 12 RNA–protein pairs in 2.4 ms