RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NCOA4Q13772 614 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 TLR1Q15399 786 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 DBN1Q16643 649 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
HMGB3P5-201ENST00000428894 RNFT1Q5M7Z0 435 aa10.47□□□□□ -0.73
HMGB3P5-201ENST00000428894 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
HMGB3P5-201ENST00000428894 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
HMGB3P5-201ENST00000428894 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.73
HMGB3P5-201ENST00000428894 GMCL1Q96IK5 515 aa10.46□□□□□ -0.73
HMGB3P5-201ENST00000428894 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
HMGB3P5-201ENST00000428894 TMEM229AB2RXF0 380 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 H7C1W4 665 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 F11P03951 625 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 GTF2IP78347 998 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 C4orf17Q53FE4 359 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
HMGB3P5-201ENST00000428894 A6NJR5 290 aa10.44□□□□□ -0.74
HMGB3P5-201ENST00000428894 SMTNP53814 917 aa10.44□□□□□ -0.74
HMGB3P5-201ENST00000428894 RHBDD1Q8TEB9 315 aa10.44□□□□□ -0.74
HMGB3P5-201ENST00000428894 PSME1Q06323 249 aa10.43□□□□□ -0.74
HMGB3P5-201ENST00000428894 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
HMGB3P5-201ENST00000428894 GPAMQ9HCL2 828 aa10.43□□□□□ -0.74
HMGB3P5-201ENST00000428894 A0A1B0GTH6 734 aa10.42□□□□□ -0.74
HMGB3P5-201ENST00000428894 GPR25O00155 361 aa10.42□□□□□ -0.74
HMGB3P5-201ENST00000428894 ATP9BO43861 1147 aa10.42□□□□□ -0.74
HMGB3P5-201ENST00000428894 GLMNQ92990 594 aa10.42□□□□□ -0.74
HMGB3P5-201ENST00000428894 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
HMGB3P5-201ENST00000428894 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 USP17L1Q7RTZ2 530 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 NUCKS1Q9H1E3 243 aaKnown RBP10.41□□□□□ -0.74
HMGB3P5-201ENST00000428894 MSX1P28360 303 aa10.4□□□□□ -0.74
HMGB3P5-201ENST00000428894 GAS6Q14393 721 aa10.4□□□□□ -0.74
HMGB3P5-201ENST00000428894 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
HMGB3P5-201ENST00000428894 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.4□□□□□ -0.74
HMGB3P5-201ENST00000428894 A6NJY4 79 aa10.39□□□□□ -0.75
HMGB3P5-201ENST00000428894 PLA2G4AP47712 749 aa10.39□□□□□ -0.75
HMGB3P5-201ENST00000428894 NIFKQ9BYG3 293 aaKnown RBP10.39□□□□□ -0.75
HMGB3P5-201ENST00000428894 BACH1O14867 736 aa10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 MTFR1Q15390 333 aa10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 CALR3Q96L12 384 aaKnown RBP10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 TRERF1Q96PN7 1200 aa10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 RUBCNLQ9H714 662 aa10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 ZNF358Q9NW07 568 aa10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
HMGB3P5-201ENST00000428894 CDK2AP1O14519 115 aa10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 CSB-PGBD3P0DP91 1061 aa10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 PGBD3Q8N328 593 aa10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
HMGB3P5-201ENST00000428894 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 THBS1P07996 1170 aa10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 USP3Q9Y6I4 520 aa10.36□□□□□ -0.75
HMGB3P5-201ENST00000428894 CLDN10P78369 228 aa10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 SRSF11Q05519 484 aaKnown RBP10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 CCDC102BQ68D86 513 aa10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 TPCN2Q8NHX9 752 aa10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 WHAMMQ8TF30 809 aa10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 DNAAF2Q9NVR5 837 aaKnown RBP10.35□□□□□ -0.75
HMGB3P5-201ENST00000428894 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
HMGB3P5-201ENST00000428894 KIAA1024Q9UPX6 916 aa10.34□□□□□ -0.75
HMGB3P5-201ENST00000428894 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 EFHC2Q5JST6 749 aa10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 SVOPQ8N4V2 548 aa10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
HMGB3P5-201ENST00000428894 TNS4Q8IZW8 715 aa10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 LARGE2Q8N3Y3 721 aa10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 CFHR5Q9BXR6 569 aa10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 PPP1R12CQ9BZL4 782 aa10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 CRISPLD1Q9H336 500 aa10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
HMGB3P5-201ENST00000428894 IGF1RP08069 1367 aa10.31□□□□□ -0.76
HMGB3P5-201ENST00000428894 MX2P20592 715 aa10.31□□□□□ -0.76
HMGB3P5-201ENST00000428894 LYPD4Q6UWN0 246 aa10.31□□□□□ -0.76
HMGB3P5-201ENST00000428894 C1orf216Q8TAB5 229 aa10.31□□□□□ -0.76
HMGB3P5-201ENST00000428894 ATP4AP20648 1035 aa10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 UBAP2LQ14157 1087 aaKnown RBP10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 ZNF594Q96JF6 807 aaPredicted RBP10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 PARP3Q9Y6F1 533 aa10.3□□□□□ -0.76
HMGB3P5-201ENST00000428894 RASA1P20936 1047 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms