RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
TTC3-208ENST00000428693 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
TTC3-208ENST00000428693 GNPATO15228 680 aa16.34■□□□□ 0.21
TTC3-208ENST00000428693 MTHFSP49914 203 aa16.34■□□□□ 0.21
TTC3-208ENST00000428693 AMOTQ4VCS5 1084 aa16.34■□□□□ 0.21
TTC3-208ENST00000428693 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
TTC3-208ENST00000428693 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
TTC3-208ENST00000428693 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
TTC3-208ENST00000428693 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
TTC3-208ENST00000428693 ITPK1Q13572 414 aa16.32■□□□□ 0.2
TTC3-208ENST00000428693 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
TTC3-208ENST00000428693 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
TTC3-208ENST00000428693 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
TTC3-208ENST00000428693 GOLGB1Q14789 3259 aaKnown RBP16.31■□□□□ 0.2
TTC3-208ENST00000428693 CHD4Q14839 1912 aa16.3■□□□□ 0.2
TTC3-208ENST00000428693 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
TTC3-208ENST00000428693 HMOX1P09601 288 aa16.3■□□□□ 0.2
TTC3-208ENST00000428693 SSFA2P28290 1259 aa16.3■□□□□ 0.2
TTC3-208ENST00000428693 IL13P35225 146 aa16.3■□□□□ 0.2
TTC3-208ENST00000428693 COL24A1Q17RW2 1714 aa16.29■□□□□ 0.2
TTC3-208ENST00000428693 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
TTC3-208ENST00000428693 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
TTC3-208ENST00000428693 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
TTC3-208ENST00000428693 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
TTC3-208ENST00000428693 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.21e-8■□□□□ 10.1
TTC3-208ENST00000428693 KDM6AO15550 1401 aaPredicted RBP16.27■□□□□ 0.19
TTC3-208ENST00000428693 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
TTC3-208ENST00000428693 GRIN3BO60391 1043 aa16.26■□□□□ 0.19
TTC3-208ENST00000428693 DIAPH1O60610 1272 aaKnown RBP16.26■□□□□ 0.19
TTC3-208ENST00000428693 CD2APQ9Y5K6 639 aa16.26■□□□□ 0.19
TTC3-208ENST00000428693 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
TTC3-208ENST00000428693 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
TTC3-208ENST00000428693 RFC4P35249 363 aa16.24■□□□□ 0.19
TTC3-208ENST00000428693 AKAP4Q5JQC9 854 aa16.24■□□□□ 0.19
TTC3-208ENST00000428693 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
TTC3-208ENST00000428693 MMP10P09238 476 aa16.23■□□□□ 0.19
TTC3-208ENST00000428693 ARHGEF1Q92888 912 aaKnown RBP16.22■□□□□ 0.19
TTC3-208ENST00000428693 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
TTC3-208ENST00000428693 KDRP35968 1356 aa16.22■□□□□ 0.19
TTC3-208ENST00000428693 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
TTC3-208ENST00000428693 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
TTC3-208ENST00000428693 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
TTC3-208ENST00000428693 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
TTC3-208ENST00000428693 RC3H1Q5TC82 1133 aaKnown RBP16.2■□□□□ 0.18
TTC3-208ENST00000428693 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
TTC3-208ENST00000428693 SLC52A2Q9HAB3 445 aa16.2■□□□□ 0.18
TTC3-208ENST00000428693 RNMTO43148 476 aaKnown RBP16.19■□□□□ 0.18
TTC3-208ENST00000428693 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
TTC3-208ENST00000428693 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
TTC3-208ENST00000428693 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
TTC3-208ENST00000428693 DNAJC10Q8IXB1 793 aa16.17■□□□□ 0.18
TTC3-208ENST00000428693 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
TTC3-208ENST00000428693 SCN11AQ9UI33 1791 aa16.17■□□□□ 0.18
TTC3-208ENST00000428693 GYS1P13807 737 aa16.16■□□□□ 0.18
TTC3-208ENST00000428693 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
TTC3-208ENST00000428693 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
TTC3-208ENST00000428693 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
TTC3-208ENST00000428693 COL5A3P25940 1745 aaPredicted RBP16.16■□□□□ 0.18
TTC3-208ENST00000428693 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
TTC3-208ENST00000428693 A0A0G2JLW4 131 aa16.15■□□□□ 0.18
TTC3-208ENST00000428693 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
TTC3-208ENST00000428693 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
TTC3-208ENST00000428693 ZPR1O75312 459 aa16.14■□□□□ 0.17
TTC3-208ENST00000428693 TEFQ10587 303 aa16.14■□□□□ 0.17
TTC3-208ENST00000428693 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
TTC3-208ENST00000428693 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
TTC3-208ENST00000428693 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
TTC3-208ENST00000428693 ZNF831Q5JPB2 1677 aa16.13■□□□□ 0.17
TTC3-208ENST00000428693 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
TTC3-208ENST00000428693 FKBP8Q14318 412 aa16.12■□□□□ 0.17
TTC3-208ENST00000428693 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
TTC3-208ENST00000428693 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
TTC3-208ENST00000428693 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
TTC3-208ENST00000428693 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 DPEP1P16444 411 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 CANXP27824 592 aaKnown RBP16.11■□□□□ 0.17
TTC3-208ENST00000428693 TGFB2P61812 414 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 GPBP1L1Q9HC44 474 aaPredicted RBP16.11■□□□□ 0.17
TTC3-208ENST00000428693 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
TTC3-208ENST00000428693 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
TTC3-208ENST00000428693 TJP1Q07157 1748 aa16.11■□□□□ 0.17
TTC3-208ENST00000428693 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
TTC3-208ENST00000428693 FCHSD2O94868 740 aa16.1■□□□□ 0.17
TTC3-208ENST00000428693 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
TTC3-208ENST00000428693 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
TTC3-208ENST00000428693 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
TTC3-208ENST00000428693 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
TTC3-208ENST00000428693 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
TTC3-208ENST00000428693 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
TTC3-208ENST00000428693 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
TTC3-208ENST00000428693 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
TTC3-208ENST00000428693 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
TTC3-208ENST00000428693 PPP2R1AP30153 589 aa16.08■□□□□ 0.16
TTC3-208ENST00000428693 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
TTC3-208ENST00000428693 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
TTC3-208ENST00000428693 STARD3NLO95772 234 aa16.07■□□□□ 0.16
TTC3-208ENST00000428693 DDR1Q08345 913 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms