RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 DCAF5Q96JK2 942 aa28.68■■■□□ 2.18
PCGF3-204ENST00000427463 COL5A3P25940 1745 aaPredicted RBP28.68■■■□□ 2.18
PCGF3-204ENST00000427463 ERVV-2B6SEH9 535 aa28.67■■■□□ 2.18
PCGF3-204ENST00000427463 IL13P35225 146 aa28.67■■■□□ 2.18
PCGF3-204ENST00000427463 AMOTQ4VCS5 1084 aa28.67■■■□□ 2.18
PCGF3-204ENST00000427463 SCN11AQ9UI33 1791 aa28.67■■■□□ 2.18
PCGF3-204ENST00000427463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.66■■■□□ 2.18
PCGF3-204ENST00000427463 PHF14O94880 888 aa28.66■■■□□ 2.18
PCGF3-204ENST00000427463 GPR162Q16538 588 aa28.66■■■□□ 2.18
PCGF3-204ENST00000427463 SMIM5Q71RC9 77 aa28.66■■■□□ 2.18
PCGF3-204ENST00000427463 VIRMAQ69YN4 1812 aaKnown RBP28.66■■■□□ 2.18
PCGF3-204ENST00000427463 ATP6V1AP38606 617 aa28.65■■■□□ 2.18
PCGF3-204ENST00000427463 SULT6B1Q6IMI4 303 aa28.65■■■□□ 2.18
PCGF3-204ENST00000427463 PER1O15534 1290 aaPredicted RBP28.64■■■□□ 2.18
PCGF3-204ENST00000427463 SSFA2P28290 1259 aa28.64■■■□□ 2.18
PCGF3-204ENST00000427463 MYH14Q7Z406 1995 aaKnown RBP28.61■■■□□ 2.17
PCGF3-204ENST00000427463 GNPATO15228 680 aa28.6■■■□□ 2.17
PCGF3-204ENST00000427463 MTHFSP49914 203 aa28.6■■■□□ 2.17
PCGF3-204ENST00000427463 C1orf141Q5JVX7 400 aa28.6■■■□□ 2.17
PCGF3-204ENST00000427463 PELP1Q8IZL8 1130 aaKnown RBP28.6■■■□□ 2.17
PCGF3-204ENST00000427463 ZNF784Q8NCA9 323 aaPredicted RBP28.6■■■□□ 2.17
PCGF3-204ENST00000427463 SLC4A9Q96Q91 983 aa28.6■■■□□ 2.17
PCGF3-204ENST00000427463 CABP4P57796 275 aa28.58■■■□□ 2.17
PCGF3-204ENST00000427463 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
PCGF3-204ENST00000427463 CD2APQ9Y5K6 639 aa28.57■■■□□ 2.16
PCGF3-204ENST00000427463 CICQ96RK0 1608 aaPredicted RBP28.56■■■□□ 2.16
PCGF3-204ENST00000427463 RBM42Q9BTD8 480 aaKnown RBP28.56■■■□□ 2.16
PCGF3-204ENST00000427463 C4AP0C0L4 1744 aa28.55■■■□□ 2.16
PCGF3-204ENST00000427463 YBX3P16989 372 aaKnown RBP eCLIP28.55■■■□□ 2.16
PCGF3-204ENST00000427463 TJP1Q07157 1748 aa28.55■■■□□ 2.16
PCGF3-204ENST00000427463 NPC1L1Q9UHC9 1359 aa28.54■■■□□ 2.16
PCGF3-204ENST00000427463 CNTNAP4Q9C0A0 1308 aa28.52■■■□□ 2.16
PCGF3-204ENST00000427463 NFATC2IPQ8NCF5 419 aa28.52■■■□□ 2.16
PCGF3-204ENST00000427463 COL3A1P02461 1466 aaPredicted RBP28.52■■■□□ 2.16
PCGF3-204ENST00000427463 ADAMTS7Q9UKP4 1686 aa28.51■■■□□ 2.16
PCGF3-204ENST00000427463 KIF13BQ9NQT8 1826 aa28.51■■■□□ 2.15
PCGF3-204ENST00000427463 RTCBQ9Y3I0 505 aaKnown RBP28.51■■■□□ 2.15
PCGF3-204ENST00000427463 MRC1P22897 1456 aa28.51■■■□□ 2.15
PCGF3-204ENST00000427463 HMOX1P09601 288 aa28.5■■■□□ 2.15
PCGF3-204ENST00000427463 AKAP4Q5JQC9 854 aa28.5■■■□□ 2.15
PCGF3-204ENST00000427463 RC3H1Q5TC82 1133 aaKnown RBP28.5■■■□□ 2.15
PCGF3-204ENST00000427463 GRIN3BO60391 1043 aa28.48■■■□□ 2.15
PCGF3-204ENST00000427463 DIAPH1O60610 1272 aaKnown RBP28.48■■■□□ 2.15
PCGF3-204ENST00000427463 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
PCGF3-204ENST00000427463 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
PCGF3-204ENST00000427463 ADRA2BP18089 450 aa28.46■■■□□ 2.15
PCGF3-204ENST00000427463 KIAA1551Q9HCM1 1747 aa28.46■■■□□ 2.15
PCGF3-204ENST00000427463 RPS6KA4O75676 772 aa28.45■■■□□ 2.14
PCGF3-204ENST00000427463 MMP10P09238 476 aa28.44■■■□□ 2.14
PCGF3-204ENST00000427463 ARHGEF1Q92888 912 aaKnown RBP28.44■■■□□ 2.14
PCGF3-204ENST00000427463 SLC52A2Q9HAB3 445 aa28.44■■■□□ 2.14
PCGF3-204ENST00000427463 LGR6Q9HBX8 967 aa28.44■■■□□ 2.14
PCGF3-204ENST00000427463 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
PCGF3-204ENST00000427463 MTHFSDQ2M296 383 aaKnown RBP28.42■■■□□ 2.14
PCGF3-204ENST00000427463 N4BP2Q86UW6 1770 aaPredicted RBP28.42■■■□□ 2.14
PCGF3-204ENST00000427463 RNMTO43148 476 aaKnown RBP28.41■■■□□ 2.14
PCGF3-204ENST00000427463 CRKLP46109 303 aaKnown RBP28.41■■■□□ 2.14
PCGF3-204ENST00000427463 UBR2Q8IWV8 1755 aa28.41■■■□□ 2.14
PCGF3-204ENST00000427463 NLGN1Q8N2Q7 840 aa28.4■■■□□ 2.14
PCGF3-204ENST00000427463 KCPQ6ZWJ8 1503 aa28.39■■■□□ 2.14
PCGF3-204ENST00000427463 GYS1P13807 737 aa28.39■■■□□ 2.14
PCGF3-204ENST00000427463 RFC4P35249 363 aa28.39■■■□□ 2.14
PCGF3-204ENST00000427463 C10orf71Q711Q0 1435 aa28.37■■■□□ 2.13
PCGF3-204ENST00000427463 PXDNLA1KZ92 1463 aa28.37■■■□□ 2.13
PCGF3-204ENST00000427463 SIPA1L3O60292 1781 aaPredicted RBP28.37■■■□□ 2.13
PCGF3-204ENST00000427463 BRCA1P38398 1863 aaKnown RBP28.36■■■□□ 2.13
PCGF3-204ENST00000427463 WWC3Q9ULE0 1092 aa28.36■■■□□ 2.13
PCGF3-204ENST00000427463 SLC39A6Q13433 755 aa28.35■■■□□ 2.13
PCGF3-204ENST00000427463 U2SURPO15042 1029 aaKnown RBP28.34■■■□□ 2.13
PCGF3-204ENST00000427463 INTS5Q6P9B9 1019 aaKnown RBP28.34■■■□□ 2.13
PCGF3-204ENST00000427463 DNAJC10Q8IXB1 793 aa28.33■■■□□ 2.13
PCGF3-204ENST00000427463 USP42Q9H9J4 1324 aaKnown RBP28.33■■■□□ 2.13
PCGF3-204ENST00000427463 SRP68Q9UHB9 627 aaKnown RBP28.31■■■□□ 2.12
PCGF3-204ENST00000427463 CCDC87Q9NVE4 849 aa28.3■■■□□ 2.12
PCGF3-204ENST00000427463 ADCY9O60503 1353 aa28.29■■■□□ 2.12
PCGF3-204ENST00000427463 ATP10DQ9P241 1426 aa28.28■■■□□ 2.12
PCGF3-204ENST00000427463 CYP19A1P11511 503 aaPredicted RBP28.28■■■□□ 2.12
PCGF3-204ENST00000427463 TGFB2P61812 414 aa28.28■■■□□ 2.12
PCGF3-204ENST00000427463 GAS2L2Q8NHY3 880 aa28.28■■■□□ 2.12
PCGF3-204ENST00000427463 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
PCGF3-204ENST00000427463 SOS1Q07889 1333 aaPredicted RBP28.27■■■□□ 2.12
PCGF3-204ENST00000427463 C1QTNF8P60827 252 aa28.27■■■□□ 2.12
PCGF3-204ENST00000427463 FKBP8Q14318 412 aa28.27■■■□□ 2.12
PCGF3-204ENST00000427463 ARFGEF1Q9Y6D6 1849 aa28.25■■■□□ 2.11
PCGF3-204ENST00000427463 GNAT3A8MTJ3 354 aa28.25■■■□□ 2.11
PCGF3-204ENST00000427463 GIGYF1O75420 1035 aaPredicted RBP28.25■■■□□ 2.11
PCGF3-204ENST00000427463 VSIG10Q8N0Z9 540 aa28.25■■■□□ 2.11
PCGF3-204ENST00000427463 CFAP53Q96M91 514 aa28.25■■■□□ 2.11
PCGF3-204ENST00000427463 AFDNP55196 1824 aaKnown RBP28.25■■■□□ 2.11
PCGF3-204ENST00000427463 A0A0G2JLW4 131 aa28.24■■■□□ 2.11
PCGF3-204ENST00000427463 DDR1Q08345 913 aa28.24■■■□□ 2.11
PCGF3-204ENST00000427463 IL17REQ8NFR9 667 aa28.24■■■□□ 2.11
PCGF3-204ENST00000427463 PPP2R1AP30153 589 aa28.23■■■□□ 2.11
PCGF3-204ENST00000427463 RSPH6AQ9H0K4 717 aa28.23■■■□□ 2.11
PCGF3-204ENST00000427463 ZBTB1Q9Y2K1 713 aa28.23■■■□□ 2.11
PCGF3-204ENST00000427463 COL15A1P39059 1388 aa28.23■■■□□ 2.11
PCGF3-204ENST00000427463 PRKAR2BP31323 418 aa28.22■■■□□ 2.11
PCGF3-204ENST00000427463 DPEP1P16444 411 aa28.21■■■□□ 2.11
PCGF3-204ENST00000427463 TEFQ10587 303 aa28.21■■■□□ 2.11
PCGF3-204ENST00000427463 USPL1Q5W0Q7 1092 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms