RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 MAP3K5Q99683 1374 aa25.05■■□□□ 1.6
NUP50-207ENST00000424634 UBR3Q6ZT12 1888 aa25.04■■□□□ 1.6
NUP50-207ENST00000424634 HMOX1P09601 288 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 ATP6V1AP38606 617 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 MSL1Q68DK7 614 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 FLAD1Q8NFF5 587 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 AK7Q96M32 723 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 SLC4A9Q96Q91 983 aa25.03■■□□□ 1.6
NUP50-207ENST00000424634 C1orf141Q5JVX7 400 aa25.02■■□□□ 1.6
NUP50-207ENST00000424634 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
NUP50-207ENST00000424634 CABP4P57796 275 aa25.01■■□□□ 1.59
NUP50-207ENST00000424634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.99■■□□□ 1.59
NUP50-207ENST00000424634 PHF14O94880 888 aa24.99■■□□□ 1.59
NUP50-207ENST00000424634 YY1P25490 414 aa24.99■■□□□ 1.59
NUP50-207ENST00000424634 KLHL34Q8N239 644 aa24.99■■□□□ 1.59
NUP50-207ENST00000424634 NFATC2IPQ8NCF5 419 aa24.99■■□□□ 1.59
NUP50-207ENST00000424634 COL3A1P02461 1466 aaPredicted RBP24.98■■□□□ 1.59
NUP50-207ENST00000424634 RBM42Q9BTD8 480 aaKnown RBP24.98■■□□□ 1.59
NUP50-207ENST00000424634 SCN11AQ9UI33 1791 aa24.98■■□□□ 1.59
NUP50-207ENST00000424634 AKAP4Q5JQC9 854 aa24.97■■□□□ 1.59
NUP50-207ENST00000424634 GOLGB1Q14789 3259 aaKnown RBP24.97■■□□□ 1.59
NUP50-207ENST00000424634 SSFA2P28290 1259 aa24.96■■□□□ 1.59
NUP50-207ENST00000424634 NLGN2Q8NFZ4 835 aa24.96■■□□□ 1.59
NUP50-207ENST00000424634 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
NUP50-207ENST00000424634 ZNF831Q5JPB2 1677 aa24.96■■□□□ 1.59
NUP50-207ENST00000424634 GNPATO15228 680 aa24.95■■□□□ 1.58
NUP50-207ENST00000424634 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
NUP50-207ENST00000424634 VIRMAQ69YN4 1812 aaKnown RBP24.92■■□□□ 1.58
NUP50-207ENST00000424634 PTCD1O75127 700 aaKnown RBP24.92■■□□□ 1.58
NUP50-207ENST00000424634 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
NUP50-207ENST00000424634 MYH14Q7Z406 1995 aaKnown RBP24.91■■□□□ 1.58
NUP50-207ENST00000424634 U2SURPO15042 1029 aaKnown RBP24.9■■□□□ 1.58
NUP50-207ENST00000424634 RNMTO43148 476 aaKnown RBP24.9■■□□□ 1.58
NUP50-207ENST00000424634 RC3H1Q5TC82 1133 aaKnown RBP24.9■■□□□ 1.58
NUP50-207ENST00000424634 SLC52A2Q9HAB3 445 aa24.9■■□□□ 1.58
NUP50-207ENST00000424634 GPR162Q16538 588 aa24.88■■□□□ 1.57
NUP50-207ENST00000424634 CNTNAP4Q9C0A0 1308 aa24.87■■□□□ 1.57
NUP50-207ENST00000424634 RTCBQ9Y3I0 505 aaKnown RBP24.87■■□□□ 1.57
NUP50-207ENST00000424634 CHD4Q14839 1912 aa24.86■■□□□ 1.57
NUP50-207ENST00000424634 ADAMTS7Q9UKP4 1686 aa24.86■■□□□ 1.57
NUP50-207ENST00000424634 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
NUP50-207ENST00000424634 TRAPPC3LQ5T215 181 aa24.86■■□□□ 1.57
NUP50-207ENST00000424634 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
NUP50-207ENST00000424634 ARHGEF1Q92888 912 aaKnown RBP24.85■■□□□ 1.57
NUP50-207ENST00000424634 CD2APQ9Y5K6 639 aa24.85■■□□□ 1.57
NUP50-207ENST00000424634 MRC1P22897 1456 aa24.84■■□□□ 1.57
NUP50-207ENST00000424634 TJP1Q07157 1748 aa24.84■■□□□ 1.57
NUP50-207ENST00000424634 SLC39A6Q13433 755 aa24.84■■□□□ 1.57
NUP50-207ENST00000424634 PELP1Q8IZL8 1130 aaKnown RBP24.84■■□□□ 1.57
NUP50-207ENST00000424634 YBX3P16989 372 aaKnown RBP eCLIP24.82■■□□□ 1.56
NUP50-207ENST00000424634 CRKLP46109 303 aaKnown RBP24.82■■□□□ 1.56
NUP50-207ENST00000424634 CFAP53Q96M91 514 aa24.82■■□□□ 1.56
NUP50-207ENST00000424634 ADRA2BP18089 450 aa24.81■■□□□ 1.56
NUP50-207ENST00000424634 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
NUP50-207ENST00000424634 CICQ96RK0 1608 aaPredicted RBP24.81■■□□□ 1.56
NUP50-207ENST00000424634 INTS5Q6P9B9 1019 aaKnown RBP24.8■■□□□ 1.56
NUP50-207ENST00000424634 DNAJC10Q8IXB1 793 aa24.8■■□□□ 1.56
NUP50-207ENST00000424634 IL17REQ8NFR9 667 aa24.8■■□□□ 1.56
NUP50-207ENST00000424634 RSPH6AQ9H0K4 717 aa24.8■■□□□ 1.56
NUP50-207ENST00000424634 MMP10P09238 476 aa24.79■■□□□ 1.56
NUP50-207ENST00000424634 KCPQ6ZWJ8 1503 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 GYS1P13807 737 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 RFC4P35249 363 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 GAS2L2Q8NHY3 880 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 C4AP0C0L4 1744 aa24.78■■□□□ 1.56
NUP50-207ENST00000424634 GNAT3A8MTJ3 354 aa24.77■■□□□ 1.56
NUP50-207ENST00000424634 NLGN1Q8N2Q7 840 aa24.77■■□□□ 1.56
NUP50-207ENST00000424634 NUDCQ9Y266 331 aa24.76■■□□□ 1.55
NUP50-207ENST00000424634 CYP19A1P11511 503 aaPredicted RBP24.75■■□□□ 1.55
NUP50-207ENST00000424634 ZNF784Q8NCA9 323 aaPredicted RBP24.75■■□□□ 1.55
NUP50-207ENST00000424634 U2AF1L5P0DN76 240 aaPredicted RBP24.74■■□□□ 1.55
NUP50-207ENST00000424634 U2AF1Q01081 240 aaKnown RBP eCLIP24.74■■□□□ 1.55
NUP50-207ENST00000424634 SRP68Q9UHB9 627 aaKnown RBP24.74■■□□□ 1.55
NUP50-207ENST00000424634 SIPA1L3O60292 1781 aaPredicted RBP24.73■■□□□ 1.55
NUP50-207ENST00000424634 UBR2Q8IWV8 1755 aa24.73■■□□□ 1.55
NUP50-207ENST00000424634 CCDC87Q9NVE4 849 aa24.73■■□□□ 1.55
NUP50-207ENST00000424634 GRIN3BO60391 1043 aa24.72■■□□□ 1.55
NUP50-207ENST00000424634 TEFQ10587 303 aa24.71■■□□□ 1.55
NUP50-207ENST00000424634 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
NUP50-207ENST00000424634 KIF13BQ9NQT8 1826 aa24.7■■□□□ 1.55
NUP50-207ENST00000424634 CEMIPQ8WUJ3 1361 aa24.7■■□□□ 1.55
NUP50-207ENST00000424634 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
NUP50-207ENST00000424634 FCHSD2O94868 740 aa24.7■■□□□ 1.54
NUP50-207ENST00000424634 FKBP8Q14318 412 aa24.7■■□□□ 1.54
NUP50-207ENST00000424634 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
NUP50-207ENST00000424634 SOS1Q07889 1333 aaPredicted RBP24.69■■□□□ 1.54
NUP50-207ENST00000424634 ZNF790Q6PG37 636 aa24.68■■□□□ 1.54
NUP50-207ENST00000424634 TTC5Q8N0Z6 440 aa24.68■■□□□ 1.54
NUP50-207ENST00000424634 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
NUP50-207ENST00000424634 ZBTB1Q9Y2K1 713 aa24.68■■□□□ 1.54
NUP50-207ENST00000424634 KIAA1551Q9HCM1 1747 aa24.67■■□□□ 1.54
NUP50-207ENST00000424634 PARP3Q9Y6F1 533 aa24.66■■□□□ 1.54
NUP50-207ENST00000424634 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
NUP50-207ENST00000424634 KCNQ3O43525 872 aa24.65■■□□□ 1.54
NUP50-207ENST00000424634 DDR1Q08345 913 aa24.65■■□□□ 1.54
NUP50-207ENST00000424634 USPL1Q5W0Q7 1092 aa24.65■■□□□ 1.54
NUP50-207ENST00000424634 C10orf71Q711Q0 1435 aa24.65■■□□□ 1.54
NUP50-207ENST00000424634 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.54
NUP50-207ENST00000424634 TM4SF1P30408 202 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms