RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SMIM5Q71RC9 77 aa20.61■□□□□ 0.89
USB1-202ENST00000423271 AK7Q96M32 723 aa20.61■□□□□ 0.89
USB1-202ENST00000423271 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
USB1-202ENST00000423271 KLHL34Q8N239 644 aa20.6■□□□□ 0.89
USB1-202ENST00000423271 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
USB1-202ENST00000423271 PHF14O94880 888 aa20.58■□□□□ 0.89
USB1-202ENST00000423271 HMOX1P09601 288 aa20.58■□□□□ 0.89
USB1-202ENST00000423271 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
USB1-202ENST00000423271 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.89
USB1-202ENST00000423271 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
USB1-202ENST00000423271 FLAD1Q8NFF5 587 aa20.57■□□□□ 0.88
USB1-202ENST00000423271 SLC4A9Q96Q91 983 aa20.57■□□□□ 0.88
USB1-202ENST00000423271 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
USB1-202ENST00000423271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
USB1-202ENST00000423271 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
USB1-202ENST00000423271 YY1P25490 414 aa20.56■□□□□ 0.88
USB1-202ENST00000423271 CABP4P57796 275 aa20.56■□□□□ 0.88
USB1-202ENST00000423271 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
USB1-202ENST00000423271 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
USB1-202ENST00000423271 COL5A3P25940 1745 aaPredicted RBP20.54■□□□□ 0.88
USB1-202ENST00000423271 NLGN2Q8NFZ4 835 aa20.54■□□□□ 0.88
USB1-202ENST00000423271 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
USB1-202ENST00000423271 GNPATO15228 680 aa20.53■□□□□ 0.88
USB1-202ENST00000423271 SSFA2P28290 1259 aa20.53■□□□□ 0.88
USB1-202ENST00000423271 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
USB1-202ENST00000423271 AKAP4Q5JQC9 854 aa20.52■□□□□ 0.88
USB1-202ENST00000423271 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
USB1-202ENST00000423271 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
USB1-202ENST00000423271 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
USB1-202ENST00000423271 MRC1P22897 1456 aa20.5■□□□□ 0.87
USB1-202ENST00000423271 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
USB1-202ENST00000423271 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
USB1-202ENST00000423271 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
USB1-202ENST00000423271 TJP1Q07157 1748 aa20.48■□□□□ 0.87
USB1-202ENST00000423271 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
USB1-202ENST00000423271 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
USB1-202ENST00000423271 RNMTO43148 476 aaKnown RBP20.47■□□□□ 0.87
USB1-202ENST00000423271 GPR162Q16538 588 aa20.47■□□□□ 0.87
USB1-202ENST00000423271 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
USB1-202ENST00000423271 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
USB1-202ENST00000423271 CICQ96RK0 1608 aaPredicted RBP20.46■□□□□ 0.87
USB1-202ENST00000423271 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
USB1-202ENST00000423271 CHD4Q14839 1912 aa20.46■□□□□ 0.87
USB1-202ENST00000423271 RTCBQ9Y3I0 505 aaKnown RBP20.45■□□□□ 0.86
USB1-202ENST00000423271 RC3H1Q5TC82 1133 aaKnown RBP20.44■□□□□ 0.86
USB1-202ENST00000423271 C4AP0C0L4 1744 aa20.44■□□□□ 0.86
USB1-202ENST00000423271 PPP2R1AP30153 589 aa20.43■□□□□ 0.86
USB1-202ENST00000423271 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
USB1-202ENST00000423271 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
USB1-202ENST00000423271 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
USB1-202ENST00000423271 TRAPPC3LQ5T215 181 aa20.42■□□□□ 0.86
USB1-202ENST00000423271 KCPQ6ZWJ8 1503 aa20.42■□□□□ 0.86
USB1-202ENST00000423271 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.86
USB1-202ENST00000423271 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
USB1-202ENST00000423271 ARHGEF1Q92888 912 aaKnown RBP20.41■□□□□ 0.86
USB1-202ENST00000423271 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
USB1-202ENST00000423271 ADRA2BP18089 450 aa20.4■□□□□ 0.86
USB1-202ENST00000423271 MMP10P09238 476 aa20.39■□□□□ 0.85
USB1-202ENST00000423271 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
USB1-202ENST00000423271 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
USB1-202ENST00000423271 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
USB1-202ENST00000423271 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
USB1-202ENST00000423271 PHACTR3Q96KR7 559 aa20.38■□□□□ 0.85
USB1-202ENST00000423271 UBR2Q8IWV8 1755 aa20.38■□□□□ 0.85
USB1-202ENST00000423271 GYS1P13807 737 aa20.37■□□□□ 0.85
USB1-202ENST00000423271 RFC4P35249 363 aa20.37■□□□□ 0.85
USB1-202ENST00000423271 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
USB1-202ENST00000423271 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
USB1-202ENST00000423271 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
USB1-202ENST00000423271 ZNF784Q8NCA9 323 aaPredicted RBP20.36■□□□□ 0.85
USB1-202ENST00000423271 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
USB1-202ENST00000423271 NLGN1Q8N2Q7 840 aa20.35■□□□□ 0.85
USB1-202ENST00000423271 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
USB1-202ENST00000423271 WWC3Q9ULE0 1092 aa20.35■□□□□ 0.85
USB1-202ENST00000423271 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
USB1-202ENST00000423271 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
USB1-202ENST00000423271 KIAA1551Q9HCM1 1747 aa20.34■□□□□ 0.85
USB1-202ENST00000423271 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
USB1-202ENST00000423271 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
USB1-202ENST00000423271 CCDC87Q9NVE4 849 aa20.34■□□□□ 0.85
USB1-202ENST00000423271 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
USB1-202ENST00000423271 CYP19A1P11511 503 aaPredicted RBP20.33■□□□□ 0.85
USB1-202ENST00000423271 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
USB1-202ENST00000423271 GRIN3BO60391 1043 aa20.32■□□□□ 0.84
USB1-202ENST00000423271 TEFQ10587 303 aa20.32■□□□□ 0.84
USB1-202ENST00000423271 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
USB1-202ENST00000423271 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
USB1-202ENST00000423271 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
USB1-202ENST00000423271 ZBTB1Q9Y2K1 713 aa20.31■□□□□ 0.84
USB1-202ENST00000423271 FKBP8Q14318 412 aa20.3■□□□□ 0.84
USB1-202ENST00000423271 TTC5Q8N0Z6 440 aa20.3■□□□□ 0.84
USB1-202ENST00000423271 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
USB1-202ENST00000423271 N4BP2Q86UW6 1770 aaPredicted RBP20.3■□□□□ 0.84
USB1-202ENST00000423271 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
USB1-202ENST00000423271 COL15A1P39059 1388 aa20.29■□□□□ 0.84
USB1-202ENST00000423271 FCHSD2O94868 740 aa20.28■□□□□ 0.84
USB1-202ENST00000423271 DDR1Q08345 913 aa20.28■□□□□ 0.84
USB1-202ENST00000423271 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
USB1-202ENST00000423271 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
USB1-202ENST00000423271 HEG1Q9ULI3 1381 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms