RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
NDUFA3-208ENST00000422029 PTCD1O75127 700 aaKnown RBP15.49■□□□□ 0.07
NDUFA3-208ENST00000422029 CABP4P57796 275 aa15.49■□□□□ 0.07
NDUFA3-208ENST00000422029 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
NDUFA3-208ENST00000422029 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
NDUFA3-208ENST00000422029 CHD4Q14839 1912 aa15.49■□□□□ 0.07
NDUFA3-208ENST00000422029 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
NDUFA3-208ENST00000422029 MTHFSP49914 203 aa15.48■□□□□ 0.07
NDUFA3-208ENST00000422029 HMOX1P09601 288 aa15.47■□□□□ 0.07
NDUFA3-208ENST00000422029 IL13P35225 146 aa15.47■□□□□ 0.07
NDUFA3-208ENST00000422029 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
NDUFA3-208ENST00000422029 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 CD2APQ9Y5K6 639 aa15.46■□□□□ 0.07
NDUFA3-208ENST00000422029 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
NDUFA3-208ENST00000422029 MMP10P09238 476 aa15.45■□□□□ 0.06
NDUFA3-208ENST00000422029 SSFA2P28290 1259 aa15.45■□□□□ 0.06
NDUFA3-208ENST00000422029 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
NDUFA3-208ENST00000422029 HSP90AB1P08238 724 aaKnown RBP15.44■□□□□ 0.06
NDUFA3-208ENST00000422029 TRAPPC3LQ5T215 181 aa15.44■□□□□ 0.06
NDUFA3-208ENST00000422029 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
NDUFA3-208ENST00000422029 LGR6Q9HBX8 967 aa15.44■□□□□ 0.06
NDUFA3-208ENST00000422029 RTCBQ9Y3I0 505 aaKnown RBP15.44■□□□□ 0.06
NDUFA3-208ENST00000422029 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
NDUFA3-208ENST00000422029 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
NDUFA3-208ENST00000422029 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
NDUFA3-208ENST00000422029 KDRP35968 1356 aa15.42■□□□□ 0.06
NDUFA3-208ENST00000422029 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
NDUFA3-208ENST00000422029 SRP68Q9UHB9 627 aaKnown RBP15.42■□□□□ 0.06
NDUFA3-208ENST00000422029 A0A0G2JLW4 131 aa15.41■□□□□ 0.06
NDUFA3-208ENST00000422029 SLC39A6Q13433 755 aa15.41■□□□□ 0.06
NDUFA3-208ENST00000422029 HMGB2P26583 209 aaKnown RBP15.4■□□□□ 0.06
NDUFA3-208ENST00000422029 RFC4P35249 363 aa15.4■□□□□ 0.06
NDUFA3-208ENST00000422029 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
NDUFA3-208ENST00000422029 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
NDUFA3-208ENST00000422029 RPS6KA4O75676 772 aa15.39■□□□□ 0.05
NDUFA3-208ENST00000422029 CRKLP46109 303 aaKnown RBP15.39■□□□□ 0.05
NDUFA3-208ENST00000422029 GYS1P13807 737 aa15.38■□□□□ 0.05
NDUFA3-208ENST00000422029 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
NDUFA3-208ENST00000422029 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
NDUFA3-208ENST00000422029 ATP10DQ9P241 1426 aa15.37■□□□□ 0.05
NDUFA3-208ENST00000422029 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
NDUFA3-208ENST00000422029 DIAPH1O60610 1272 aaKnown RBP15.37■□□□□ 0.05
NDUFA3-208ENST00000422029 RNMTO43148 476 aaKnown RBP15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 DPEP1P16444 411 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 FKBP8Q14318 412 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 AKAP4Q5JQC9 854 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 MYH14Q7Z406 1995 aaKnown RBP15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
NDUFA3-208ENST00000422029 CICQ96RK0 1608 aaPredicted RBP15.35■□□□□ 0.05
NDUFA3-208ENST00000422029 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
NDUFA3-208ENST00000422029 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
NDUFA3-208ENST00000422029 PARP3Q9Y6F1 533 aa15.35■□□□□ 0.05
NDUFA3-208ENST00000422029 UTRNP46939 3433 aa15.34■□□□□ 0.05
NDUFA3-208ENST00000422029 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
NDUFA3-208ENST00000422029 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
NDUFA3-208ENST00000422029 DDR1Q08345 913 aa15.33■□□□□ 0.04
NDUFA3-208ENST00000422029 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
NDUFA3-208ENST00000422029 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
NDUFA3-208ENST00000422029 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.04
NDUFA3-208ENST00000422029 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
NDUFA3-208ENST00000422029 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
NDUFA3-208ENST00000422029 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 FCHSD2O94868 740 aa15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 ADRA2BP18089 450 aa15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 CHRNA5P30532 468 aa15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 TJP1Q07157 1748 aa15.31■□□□□ 0.04
NDUFA3-208ENST00000422029 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
NDUFA3-208ENST00000422029 CYP19A1P11511 503 aaPredicted RBP15.3■□□□□ 0.04
NDUFA3-208ENST00000422029 USP42Q9H9J4 1324 aaKnown RBP15.3■□□□□ 0.04
NDUFA3-208ENST00000422029 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
NDUFA3-208ENST00000422029 TGFB2P61812 414 aa15.29■□□□□ 0.04
NDUFA3-208ENST00000422029 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
NDUFA3-208ENST00000422029 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
NDUFA3-208ENST00000422029 ZNF330Q9Y3S2 320 aaPredicted RBP15.29■□□□□ 0.04
NDUFA3-208ENST00000422029 C10orf71Q711Q0 1435 aa15.28■□□□□ 0.04
NDUFA3-208ENST00000422029 ZPR1O75312 459 aa15.28■□□□□ 0.04
NDUFA3-208ENST00000422029 KCNA3P22001 575 aa15.28■□□□□ 0.04
NDUFA3-208ENST00000422029 BICDL1Q6ZP65 573 aa15.28■□□□□ 0.04
NDUFA3-208ENST00000422029 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
NDUFA3-208ENST00000422029 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
NDUFA3-208ENST00000422029 KIAA1551Q9HCM1 1747 aa15.27■□□□□ 0.04
NDUFA3-208ENST00000422029 ZNF831Q5JPB2 1677 aa15.27■□□□□ 0.03
NDUFA3-208ENST00000422029 ADCY9O60503 1353 aa15.26■□□□□ 0.03
NDUFA3-208ENST00000422029 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
NDUFA3-208ENST00000422029 KCNQ3O43525 872 aa15.26■□□□□ 0.03
NDUFA3-208ENST00000422029 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
NDUFA3-208ENST00000422029 COL3A1P02461 1466 aaPredicted RBP15.26■□□□□ 0.03
NDUFA3-208ENST00000422029 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
NDUFA3-208ENST00000422029 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
NDUFA3-208ENST00000422029 TM4SF1P30408 202 aa15.25■□□□□ 0.03
NDUFA3-208ENST00000422029 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
NDUFA3-208ENST00000422029 NFIXQ14938 502 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms