RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
NDUFA3-208ENST00000422029 ABCC9O60706 1549 aa25.4■■□□□ 1.66
NDUFA3-208ENST00000422029 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
NDUFA3-208ENST00000422029 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
NDUFA3-208ENST00000422029 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
NDUFA3-208ENST00000422029 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
NDUFA3-208ENST00000422029 NACADO15069 1562 aa23.81■■□□□ 1.4
NDUFA3-208ENST00000422029 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
NDUFA3-208ENST00000422029 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
NDUFA3-208ENST00000422029 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
NDUFA3-208ENST00000422029 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
NDUFA3-208ENST00000422029 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
NDUFA3-208ENST00000422029 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
NDUFA3-208ENST00000422029 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
NDUFA3-208ENST00000422029 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
NDUFA3-208ENST00000422029 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
NDUFA3-208ENST00000422029 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
NDUFA3-208ENST00000422029 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
NDUFA3-208ENST00000422029 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
NDUFA3-208ENST00000422029 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
NDUFA3-208ENST00000422029 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
NDUFA3-208ENST00000422029 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
NDUFA3-208ENST00000422029 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
NDUFA3-208ENST00000422029 NESP48681 1621 aa21.84■■□□□ 1.09
NDUFA3-208ENST00000422029 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
NDUFA3-208ENST00000422029 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
NDUFA3-208ENST00000422029 MROH2BQ7Z745 1585 aa21.81■■□□□ 1.08
NDUFA3-208ENST00000422029 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
NDUFA3-208ENST00000422029 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
NDUFA3-208ENST00000422029 CUX2O14529 1486 aa21.66■■□□□ 1.06
NDUFA3-208ENST00000422029 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
NDUFA3-208ENST00000422029 WIZO95785 1651 aa21.56■■□□□ 1.04
NDUFA3-208ENST00000422029 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
NDUFA3-208ENST00000422029 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
NDUFA3-208ENST00000422029 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
NDUFA3-208ENST00000422029 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
NDUFA3-208ENST00000422029 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
NDUFA3-208ENST00000422029 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
NDUFA3-208ENST00000422029 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
NDUFA3-208ENST00000422029 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
NDUFA3-208ENST00000422029 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
NDUFA3-208ENST00000422029 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
NDUFA3-208ENST00000422029 WDR62O43379 1518 aa21.14■□□□□ 0.98
NDUFA3-208ENST00000422029 CFTRP13569 1480 aa21.13■□□□□ 0.97
NDUFA3-208ENST00000422029 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
NDUFA3-208ENST00000422029 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
NDUFA3-208ENST00000422029 TRIM41Q8WV44 630 aa21■□□□□ 0.95
NDUFA3-208ENST00000422029 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
NDUFA3-208ENST00000422029 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
NDUFA3-208ENST00000422029 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
NDUFA3-208ENST00000422029 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
NDUFA3-208ENST00000422029 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
NDUFA3-208ENST00000422029 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-208ENST00000422029 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
NDUFA3-208ENST00000422029 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.9
NDUFA3-208ENST00000422029 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
NDUFA3-208ENST00000422029 FBLN2P98095 1184 aa20.61■□□□□ 0.89
NDUFA3-208ENST00000422029 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
NDUFA3-208ENST00000422029 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
NDUFA3-208ENST00000422029 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
NDUFA3-208ENST00000422029 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
NDUFA3-208ENST00000422029 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
NDUFA3-208ENST00000422029 SOGA1O94964 1423 aa20.53■□□□□ 0.88
NDUFA3-208ENST00000422029 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
NDUFA3-208ENST00000422029 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
NDUFA3-208ENST00000422029 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
NDUFA3-208ENST00000422029 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
NDUFA3-208ENST00000422029 CHD1O14646 1710 aa20.47■□□□□ 0.87
NDUFA3-208ENST00000422029 CUX1P39880 1505 aa20.46■□□□□ 0.87
NDUFA3-208ENST00000422029 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
NDUFA3-208ENST00000422029 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
NDUFA3-208ENST00000422029 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
NDUFA3-208ENST00000422029 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
NDUFA3-208ENST00000422029 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
NDUFA3-208ENST00000422029 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
NDUFA3-208ENST00000422029 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
NDUFA3-208ENST00000422029 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
NDUFA3-208ENST00000422029 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
NDUFA3-208ENST00000422029 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-208ENST00000422029 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
NDUFA3-208ENST00000422029 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
NDUFA3-208ENST00000422029 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
NDUFA3-208ENST00000422029 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
NDUFA3-208ENST00000422029 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
NDUFA3-208ENST00000422029 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.811e-6■■■■■ 58.5
NDUFA3-208ENST00000422029 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
NDUFA3-208ENST00000422029 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
NDUFA3-208ENST00000422029 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
NDUFA3-208ENST00000422029 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
NDUFA3-208ENST00000422029 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
NDUFA3-208ENST00000422029 ADAMTS12P58397 1594 aa20■□□□□ 0.79
NDUFA3-208ENST00000422029 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
NDUFA3-208ENST00000422029 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
NDUFA3-208ENST00000422029 NUP160Q12769 1436 aa19.92■□□□□ 0.78
NDUFA3-208ENST00000422029 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
NDUFA3-208ENST00000422029 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
NDUFA3-208ENST00000422029 PRG4Q92954 1404 aaPredicted RBP19.83■□□□□ 0.76
NDUFA3-208ENST00000422029 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
NDUFA3-208ENST00000422029 IGF1RP08069 1367 aa19.76■□□□□ 0.75
NDUFA3-208ENST00000422029 TTBK1Q5TCY1 1321 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms