RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
UPF3AP3-201ENST00000420996 ADCY9O60503 1353 aa23.22■■□□□ 1.31
UPF3AP3-201ENST00000420996 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
UPF3AP3-201ENST00000420996 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
UPF3AP3-201ENST00000420996 KDRP35968 1356 aa23.2■■□□□ 1.3
UPF3AP3-201ENST00000420996 HSP90AB1P08238 724 aaKnown RBP23.2■■□□□ 1.3
UPF3AP3-201ENST00000420996 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
UPF3AP3-201ENST00000420996 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
UPF3AP3-201ENST00000420996 MMP10P09238 476 aa23.18■■□□□ 1.3
UPF3AP3-201ENST00000420996 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
UPF3AP3-201ENST00000420996 TRAPPC3LQ5T215 181 aa23.18■■□□□ 1.3
UPF3AP3-201ENST00000420996 RTCBQ9Y3I0 505 aaKnown RBP23.18■■□□□ 1.3
UPF3AP3-201ENST00000420996 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
UPF3AP3-201ENST00000420996 RC3H1Q5TC82 1133 aaKnown RBP23.17■■□□□ 1.3
UPF3AP3-201ENST00000420996 SLC4A9Q96Q91 983 aa23.17■■□□□ 1.3
UPF3AP3-201ENST00000420996 PANK3Q9H999 370 aa23.17■■□□□ 1.3
UPF3AP3-201ENST00000420996 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
UPF3AP3-201ENST00000420996 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
UPF3AP3-201ENST00000420996 COL5A3P25940 1745 aaPredicted RBP23.16■■□□□ 1.3
UPF3AP3-201ENST00000420996 ADRA2BP18089 450 aa23.15■■□□□ 1.3
UPF3AP3-201ENST00000420996 AMOTQ4VCS5 1084 aa23.15■■□□□ 1.3
UPF3AP3-201ENST00000420996 NLGN1Q8N2Q7 840 aa23.15■■□□□ 1.3
UPF3AP3-201ENST00000420996 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
UPF3AP3-201ENST00000420996 ZNF530Q6P9A1 599 aaPredicted RBP23.14■■□□□ 1.29
UPF3AP3-201ENST00000420996 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.29
UPF3AP3-201ENST00000420996 CNTNAP4Q9C0A0 1308 aa23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 CABP4P57796 275 aa23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 TGFB2P61812 414 aa23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 ARHGEF1Q92888 912 aaKnown RBP23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 KDM6AO15550 1401 aaPredicted RBP23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
UPF3AP3-201ENST00000420996 PXDNLA1KZ92 1463 aa23.12■■□□□ 1.29
UPF3AP3-201ENST00000420996 RPS6KA4O75676 772 aa23.12■■□□□ 1.29
UPF3AP3-201ENST00000420996 N4BP2Q86UW6 1770 aaPredicted RBP23.12■■□□□ 1.29
UPF3AP3-201ENST00000420996 MYH14Q7Z406 1995 aaKnown RBP23.1■■□□□ 1.29
UPF3AP3-201ENST00000420996 RFC4P35249 363 aa23.1■■□□□ 1.29
UPF3AP3-201ENST00000420996 MTHFSP49914 203 aa23.1■■□□□ 1.29
UPF3AP3-201ENST00000420996 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
UPF3AP3-201ENST00000420996 C4AP0C0L4 1744 aa23.09■■□□□ 1.29
UPF3AP3-201ENST00000420996 GYS1P13807 737 aa23.09■■□□□ 1.29
UPF3AP3-201ENST00000420996 C1orf141Q5JVX7 400 aa23.09■■□□□ 1.29
UPF3AP3-201ENST00000420996 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
UPF3AP3-201ENST00000420996 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
UPF3AP3-201ENST00000420996 HSPA6P17066 643 aa23.08■■□□□ 1.29
UPF3AP3-201ENST00000420996 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
UPF3AP3-201ENST00000420996 CCDC87Q9NVE4 849 aa23.08■■□□□ 1.29
UPF3AP3-201ENST00000420996 BCS1LQ9Y276 419 aa23.07■■□□□ 1.28
UPF3AP3-201ENST00000420996 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
UPF3AP3-201ENST00000420996 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
UPF3AP3-201ENST00000420996 PARP3Q9Y6F1 533 aa23.06■■□□□ 1.28
UPF3AP3-201ENST00000420996 CEP350Q5VT06 3117 aa23.06■■□□□ 1.28
UPF3AP3-201ENST00000420996 KIF3CO14782 793 aa23.05■■□□□ 1.28
UPF3AP3-201ENST00000420996 SULT6B1Q6IMI4 303 aa23.05■■□□□ 1.28
UPF3AP3-201ENST00000420996 BRCA1P38398 1863 aaKnown RBP23.05■■□□□ 1.28
UPF3AP3-201ENST00000420996 DPEP1P16444 411 aa23.04■■□□□ 1.28
UPF3AP3-201ENST00000420996 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
UPF3AP3-201ENST00000420996 CRKLP46109 303 aaKnown RBP23.03■■□□□ 1.28
UPF3AP3-201ENST00000420996 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
UPF3AP3-201ENST00000420996 IL13P35225 146 aa23.02■■□□□ 1.28
UPF3AP3-201ENST00000420996 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
UPF3AP3-201ENST00000420996 TJP1Q07157 1748 aa23.02■■□□□ 1.28
UPF3AP3-201ENST00000420996 FCHSD2O94868 740 aa23.01■■□□□ 1.27
UPF3AP3-201ENST00000420996 KCNA3P22001 575 aa23■■□□□ 1.27
UPF3AP3-201ENST00000420996 ARFGEF1Q9Y6D6 1849 aa22.99■■□□□ 1.27
UPF3AP3-201ENST00000420996 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
UPF3AP3-201ENST00000420996 SRP68Q9UHB9 627 aaKnown RBP22.99■■□□□ 1.27
UPF3AP3-201ENST00000420996 USP42Q9H9J4 1324 aaKnown RBP22.99■■□□□ 1.27
UPF3AP3-201ENST00000420996 FKBP8Q14318 412 aa22.98■■□□□ 1.27
UPF3AP3-201ENST00000420996 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
UPF3AP3-201ENST00000420996 INTS5Q6P9B9 1019 aaKnown RBP22.97■■□□□ 1.27
UPF3AP3-201ENST00000420996 PIM2Q9P1W9 311 aa22.97■■□□□ 1.27
UPF3AP3-201ENST00000420996 TOMM70O94826 608 aa22.95■■□□□ 1.26
UPF3AP3-201ENST00000420996 DDR1Q08345 913 aa22.95■■□□□ 1.26
UPF3AP3-201ENST00000420996 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
UPF3AP3-201ENST00000420996 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
UPF3AP3-201ENST00000420996 ADAMTS7Q9UKP4 1686 aa22.95■■□□□ 1.26
UPF3AP3-201ENST00000420996 LGR6Q9HBX8 967 aa22.94■■□□□ 1.26
UPF3AP3-201ENST00000420996 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
UPF3AP3-201ENST00000420996 TM4SF1P30408 202 aa22.93■■□□□ 1.26
UPF3AP3-201ENST00000420996 DALRD3Q5D0E6 543 aaKnown RBP22.93■■□□□ 1.26
UPF3AP3-201ENST00000420996 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
UPF3AP3-201ENST00000420996 RNMTO43148 476 aaKnown RBP22.92■■□□□ 1.26
UPF3AP3-201ENST00000420996 C9orf131Q5VYM1 1079 aa22.92■■□□□ 1.26
UPF3AP3-201ENST00000420996 MRC1P22897 1456 aa22.92■■□□□ 1.26
UPF3AP3-201ENST00000420996 POLRMTO00411 1230 aaKnown RBP22.91■■□□□ 1.26
UPF3AP3-201ENST00000420996 ZPR1O75312 459 aa22.91■■□□□ 1.26
UPF3AP3-201ENST00000420996 APLP1P51693 650 aa22.91■■□□□ 1.26
UPF3AP3-201ENST00000420996 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
UPF3AP3-201ENST00000420996 NMRK2Q9NPI5 230 aa22.91■■□□□ 1.26
UPF3AP3-201ENST00000420996 SOS1Q07889 1333 aaPredicted RBP22.9■■□□□ 1.26
UPF3AP3-201ENST00000420996 CYP19A1P11511 503 aaPredicted RBP22.9■■□□□ 1.26
UPF3AP3-201ENST00000420996 HMOX1P09601 288 aa22.89■■□□□ 1.25
UPF3AP3-201ENST00000420996 CHRNA5P30532 468 aa22.89■■□□□ 1.25
UPF3AP3-201ENST00000420996 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
UPF3AP3-201ENST00000420996 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
UPF3AP3-201ENST00000420996 KIF7Q2M1P5 1343 aa22.87■■□□□ 1.25
UPF3AP3-201ENST00000420996 SBF1O95248 1867 aa22.87■■□□□ 1.25
UPF3AP3-201ENST00000420996 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms