RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
PRAME-207ENST00000420709 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
PRAME-207ENST00000420709 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
PRAME-207ENST00000420709 ZNF530Q6P9A1 599 aaPredicted RBP17.6■□□□□ 0.41
PRAME-207ENST00000420709 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
PRAME-207ENST00000420709 KDM6AO15550 1401 aaPredicted RBP17.6■□□□□ 0.41
PRAME-207ENST00000420709 KDRP35968 1356 aa17.59■□□□□ 0.41
PRAME-207ENST00000420709 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
PRAME-207ENST00000420709 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
PRAME-207ENST00000420709 C1QTNF8P60827 252 aa17.58■□□□□ 0.4
PRAME-207ENST00000420709 PLEKHG2Q9H7P9 1386 aa17.57■□□□□ 0.4
PRAME-207ENST00000420709 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
PRAME-207ENST00000420709 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
PRAME-207ENST00000420709 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
PRAME-207ENST00000420709 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
PRAME-207ENST00000420709 GIGYF1O75420 1035 aaPredicted RBP17.56■□□□□ 0.4
PRAME-207ENST00000420709 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
PRAME-207ENST00000420709 CABP4P57796 275 aa17.56■□□□□ 0.4
PRAME-207ENST00000420709 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
PRAME-207ENST00000420709 COL5A3P25940 1745 aaPredicted RBP17.55■□□□□ 0.4
PRAME-207ENST00000420709 AMOTQ4VCS5 1084 aa17.55■□□□□ 0.4
PRAME-207ENST00000420709 MTHFSP49914 203 aa17.54■□□□□ 0.4
PRAME-207ENST00000420709 C1orf141Q5JVX7 400 aa17.54■□□□□ 0.4
PRAME-207ENST00000420709 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
PRAME-207ENST00000420709 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
PRAME-207ENST00000420709 ZNF831Q5JPB2 1677 aa17.53■□□□□ 0.4
PRAME-207ENST00000420709 MMP10P09238 476 aa17.53■□□□□ 0.4
PRAME-207ENST00000420709 IL13P35225 146 aa17.53■□□□□ 0.4
PRAME-207ENST00000420709 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.4
PRAME-207ENST00000420709 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
PRAME-207ENST00000420709 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
PRAME-207ENST00000420709 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
PRAME-207ENST00000420709 ATP10DQ9P241 1426 aa17.52■□□□□ 0.4
PRAME-207ENST00000420709 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
PRAME-207ENST00000420709 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
PRAME-207ENST00000420709 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
PRAME-207ENST00000420709 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
PRAME-207ENST00000420709 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
PRAME-207ENST00000420709 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
PRAME-207ENST00000420709 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
PRAME-207ENST00000420709 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
PRAME-207ENST00000420709 ZNF526Q8TF50 670 aaPredicted RBP17.49■□□□□ 0.39
PRAME-207ENST00000420709 PXDNLA1KZ92 1463 aa17.49■□□□□ 0.39
PRAME-207ENST00000420709 TJP1Q07157 1748 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 KIAA1551Q9HCM1 1747 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 HMOX1P09601 288 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 GYS1P13807 737 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 RFC4P35249 363 aa17.48■□□□□ 0.39
PRAME-207ENST00000420709 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
PRAME-207ENST00000420709 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
PRAME-207ENST00000420709 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
PRAME-207ENST00000420709 ADCY9O60503 1353 aa17.47■□□□□ 0.39
PRAME-207ENST00000420709 ADRA2BP18089 450 aa17.46■□□□□ 0.39
PRAME-207ENST00000420709 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
PRAME-207ENST00000420709 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
PRAME-207ENST00000420709 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
PRAME-207ENST00000420709 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
PRAME-207ENST00000420709 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
PRAME-207ENST00000420709 A0A0G2JLW4 131 aa17.45■□□□□ 0.38
PRAME-207ENST00000420709 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
PRAME-207ENST00000420709 GPBP1L1Q9HC44 474 aaPredicted RBP17.45■□□□□ 0.38
PRAME-207ENST00000420709 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
PRAME-207ENST00000420709 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
PRAME-207ENST00000420709 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
PRAME-207ENST00000420709 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
PRAME-207ENST00000420709 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
PRAME-207ENST00000420709 SLC52A2Q9HAB3 445 aa17.43■□□□□ 0.38
PRAME-207ENST00000420709 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
PRAME-207ENST00000420709 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
PRAME-207ENST00000420709 DPEP1P16444 411 aa17.42■□□□□ 0.38
PRAME-207ENST00000420709 TGFB2P61812 414 aa17.42■□□□□ 0.38
PRAME-207ENST00000420709 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
PRAME-207ENST00000420709 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
PRAME-207ENST00000420709 FKBP8Q14318 412 aa17.41■□□□□ 0.38
PRAME-207ENST00000420709 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
PRAME-207ENST00000420709 INTS5Q6P9B9 1019 aaKnown RBP17.41■□□□□ 0.38
PRAME-207ENST00000420709 MRC1P22897 1456 aa17.41■□□□□ 0.38
PRAME-207ENST00000420709 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
PRAME-207ENST00000420709 CEP350Q5VT06 3117 aa17.4■□□□□ 0.38
PRAME-207ENST00000420709 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
PRAME-207ENST00000420709 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
PRAME-207ENST00000420709 DDR1Q08345 913 aa17.39■□□□□ 0.37
PRAME-207ENST00000420709 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
PRAME-207ENST00000420709 FCHSD2O94868 740 aa17.38■□□□□ 0.37
PRAME-207ENST00000420709 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
PRAME-207ENST00000420709 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
PRAME-207ENST00000420709 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
PRAME-207ENST00000420709 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
PRAME-207ENST00000420709 CYP19A1P11511 503 aaPredicted RBP17.36■□□□□ 0.37
PRAME-207ENST00000420709 KCNA3P22001 575 aa17.36■□□□□ 0.37
PRAME-207ENST00000420709 SOS1Q07889 1333 aaPredicted RBP17.36■□□□□ 0.37
PRAME-207ENST00000420709 ZPR1O75312 459 aa17.35■□□□□ 0.37
PRAME-207ENST00000420709 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
PRAME-207ENST00000420709 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
PRAME-207ENST00000420709 CHRNA5P30532 468 aa17.34■□□□□ 0.37
PRAME-207ENST00000420709 COL15A1P39059 1388 aa17.34■□□□□ 0.37
PRAME-207ENST00000420709 UBR2Q8IWV8 1755 aa17.33■□□□□ 0.37
PRAME-207ENST00000420709 KIF3CO14782 793 aa17.33■□□□□ 0.36
PRAME-207ENST00000420709 TM4SF1P30408 202 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms