RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
CCT6P3-201ENST00000419314 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
CCT6P3-201ENST00000419314 OTUD7AQ8TE49 926 aaPredicted RBP17.1■□□□□ 0.33
CCT6P3-201ENST00000419314 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
CCT6P3-201ENST00000419314 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
CCT6P3-201ENST00000419314 CDC45O75419 566 aa17.09■□□□□ 0.33
CCT6P3-201ENST00000419314 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
CCT6P3-201ENST00000419314 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
CCT6P3-201ENST00000419314 USP19O94966 1318 aa17.08■□□□□ 0.33
CCT6P3-201ENST00000419314 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.33
CCT6P3-201ENST00000419314 SPG7Q9UQ90 795 aa17.08■□□□□ 0.33
CCT6P3-201ENST00000419314 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.33
CCT6P3-201ENST00000419314 ITSN1Q15811 1721 aa17.08■□□□□ 0.33
CCT6P3-201ENST00000419314 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
CCT6P3-201ENST00000419314 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
CCT6P3-201ENST00000419314 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
CCT6P3-201ENST00000419314 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
CCT6P3-201ENST00000419314 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
CCT6P3-201ENST00000419314 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
CCT6P3-201ENST00000419314 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
CCT6P3-201ENST00000419314 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
CCT6P3-201ENST00000419314 DNAAF4Q8WXU2 420 aa17.06■□□□□ 0.32
CCT6P3-201ENST00000419314 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
CCT6P3-201ENST00000419314 CABP4P57796 275 aa17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 TBC1D2Q9BYX2 928 aa17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 DDX58O95786 925 aaKnown RBP17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
CCT6P3-201ENST00000419314 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
CCT6P3-201ENST00000419314 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
CCT6P3-201ENST00000419314 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
CCT6P3-201ENST00000419314 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
CCT6P3-201ENST00000419314 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
CCT6P3-201ENST00000419314 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
CCT6P3-201ENST00000419314 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
CCT6P3-201ENST00000419314 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
CCT6P3-201ENST00000419314 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CCT6P3-201ENST00000419314 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
CCT6P3-201ENST00000419314 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
CCT6P3-201ENST00000419314 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
CCT6P3-201ENST00000419314 CRB1P82279 1406 aa17.02■□□□□ 0.32
CCT6P3-201ENST00000419314 PPP1R42Q7Z4L9 355 aa17.02■□□□□ 0.31
CCT6P3-201ENST00000419314 ANKRD26Q9UPS8 1709 aa17.02■□□□□ 0.31
CCT6P3-201ENST00000419314 KDRP35968 1356 aa17.02■□□□□ 0.31
CCT6P3-201ENST00000419314 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
CCT6P3-201ENST00000419314 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
CCT6P3-201ENST00000419314 GZF1Q9H116 711 aaPredicted RBP17.01■□□□□ 0.31
CCT6P3-201ENST00000419314 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
CCT6P3-201ENST00000419314 RTL1A6NKG5 1358 aa17.01■□□□□ 0.31
CCT6P3-201ENST00000419314 SIL1Q9H173 461 aa17■□□□□ 0.31
CCT6P3-201ENST00000419314 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
CCT6P3-201ENST00000419314 TTC22Q5TAA0 569 aa16.99■□□□□ 0.31
CCT6P3-201ENST00000419314 SDSP20132 328 aa16.99■□□□□ 0.31
CCT6P3-201ENST00000419314 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
CCT6P3-201ENST00000419314 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 ERBB3P21860 1342 aa16.98■□□□□ 0.31
CCT6P3-201ENST00000419314 REC8O95072 547 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 KCNJ4P48050 445 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 MX1P20591 662 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
CCT6P3-201ENST00000419314 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 MCCP23508 829 aa16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
CCT6P3-201ENST00000419314 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 PDE1AP54750 535 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 MYD88Q99836 296 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 GSPT1P15170 499 aaKnown RBP16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 ZNF790Q6PG37 636 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
CCT6P3-201ENST00000419314 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
CCT6P3-201ENST00000419314 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
CCT6P3-201ENST00000419314 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
CCT6P3-201ENST00000419314 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
CCT6P3-201ENST00000419314 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
CCT6P3-201ENST00000419314 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
CCT6P3-201ENST00000419314 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
CCT6P3-201ENST00000419314 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
CCT6P3-201ENST00000419314 BRINP3Q76B58 766 aa16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 ERC2O15083 957 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms