RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 PSMA5P28066 241 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 CLNS1AP54105 237 aaKnown RBP13.68□□□□□ -0.22
DSP-202ENST00000418664 PAFAH1B1P43034 410 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
DSP-202ENST00000418664 STMN2Q93045 179 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 TRMT1Q9NXH9 659 aaKnown RBP13.68□□□□□ -0.22
DSP-202ENST00000418664 ERC2O15083 957 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 STIM2Q9P246 746 aa13.68□□□□□ -0.22
DSP-202ENST00000418664 ANKS4BQ8N8V4 417 aa13.67□□□□□ -0.22
DSP-202ENST00000418664 KIF18AQ8NI77 898 aa13.67□□□□□ -0.22
DSP-202ENST00000418664 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
DSP-202ENST00000418664 PRC1O43663 620 aa13.67□□□□□ -0.22
DSP-202ENST00000418664 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
DSP-202ENST00000418664 KIF20AO95235 890 aa13.67□□□□□ -0.22
DSP-202ENST00000418664 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
DSP-202ENST00000418664 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
DSP-202ENST00000418664 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
DSP-202ENST00000418664 MAP4K4O95819 1239 aaPredicted RBP13.66□□□□□ -0.22
DSP-202ENST00000418664 ESPNB1AK53 854 aa13.66□□□□□ -0.22
DSP-202ENST00000418664 MAP7Q14244 749 aa13.66□□□□□ -0.22
DSP-202ENST00000418664 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
DSP-202ENST00000418664 ZBTB17Q13105 803 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 TRMT1LQ7Z2T5 733 aaKnown RBP13.65□□□□□ -0.22
DSP-202ENST00000418664 NUF2Q9BZD4 464 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
DSP-202ENST00000418664 ATP6V1E1P36543 226 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 INPP1P49441 399 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
DSP-202ENST00000418664 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 CCDC114Q96M63 670 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 SELENOSQ9BQE4 189 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
DSP-202ENST00000418664 JMYQ8N9B5 988 aa13.64□□□□□ -0.23
DSP-202ENST00000418664 TRIM55Q9BYV6 548 aa13.64□□□□□ -0.23
DSP-202ENST00000418664 VCX3BQ9H321 246 aa13.64□□□□□ -0.23
DSP-202ENST00000418664 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
DSP-202ENST00000418664 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
DSP-202ENST00000418664 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
DSP-202ENST00000418664 PPP1R12AO14974 1030 aaPredicted RBP13.64□□□□□ -0.23
DSP-202ENST00000418664 IVLP07476 585 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 SF3B2Q13435 895 aaKnown RBP13.63□□□□□ -0.23
DSP-202ENST00000418664 CEP85LQ5SZL2 805 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
DSP-202ENST00000418664 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
DSP-202ENST00000418664 SH3BGRP55822 239 aaPredicted RBP13.63□□□□□ -0.23
DSP-202ENST00000418664 TXNDC9O14530 226 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 ZKSCAN2Q63HK3 967 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
DSP-202ENST00000418664 RNF8O76064 485 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 CAMK4Q16566 473 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 FERMT1Q9BQL6 677 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 LMNTD2Q8IXW0 634 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 TACC3Q9Y6A5 838 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 C16orf45Q96MC5 204 aaPredicted RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 BUB1BO60566 1050 aaPredicted RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 CIB2O75838 187 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 CALCOCO2Q13137 446 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
DSP-202ENST00000418664 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
DSP-202ENST00000418664 SNX16P57768 344 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 BIRC2Q13490 618 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
DSP-202ENST00000418664 KLHL10Q6JEL2 608 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 PPP4R4Q6NUP7 873 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
DSP-202ENST00000418664 ATP11AP98196 1134 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 LRCH2Q5VUJ6 765 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 VCXQ9H320 206 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 SMIM23A6NLE4 172 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 SLC4A1P02730 911 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
DSP-202ENST00000418664 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
DSP-202ENST00000418664 SPECC1L-ADORA2AF8WAN1 911 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 NEK4P51957 841 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 COG7P83436 770 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 NUP88Q99567 741 aaPredicted RBP13.6□□□□□ -0.23
DSP-202ENST00000418664 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
DSP-202ENST00000418664 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms