RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MEGF6O75095 1541 aa21.21■□□□□ 0.99
SSBP3-205ENST00000417664 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-205ENST00000417664 PDE4AP27815 886 aa21.2■□□□□ 0.98
SSBP3-205ENST00000417664 BACH2Q9BYV9 841 aa21.2■□□□□ 0.98
SSBP3-205ENST00000417664 VIRMAQ69YN4 1812 aaKnown RBP21.2■□□□□ 0.98
SSBP3-205ENST00000417664 PKD1L3Q7Z443 1732 aa21.19■□□□□ 0.98
SSBP3-205ENST00000417664 PHKG2P15735 406 aa21.19■□□□□ 0.98
SSBP3-205ENST00000417664 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
SSBP3-205ENST00000417664 HDGFL1Q5TGJ6 251 aa21.18■□□□□ 0.98
SSBP3-205ENST00000417664 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
SSBP3-205ENST00000417664 ROBO1Q9Y6N7 1651 aa21.17■□□□□ 0.98
SSBP3-205ENST00000417664 CCT4P50991 539 aaKnown RBP21.17■□□□□ 0.98
SSBP3-205ENST00000417664 CARD10Q9BWT7 1032 aa21.17■□□□□ 0.98
SSBP3-205ENST00000417664 FLIIQ13045 1269 aa21.16■□□□□ 0.98
SSBP3-205ENST00000417664 TOM1L2Q6ZVM7 507 aa21.16■□□□□ 0.98
SSBP3-205ENST00000417664 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
SSBP3-205ENST00000417664 SCN11AQ9UI33 1791 aa21.16■□□□□ 0.98
SSBP3-205ENST00000417664 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
SSBP3-205ENST00000417664 HEG1Q9ULI3 1381 aa21.15■□□□□ 0.98
SSBP3-205ENST00000417664 RGS3P49796 1198 aa21.15■□□□□ 0.98
SSBP3-205ENST00000417664 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
SSBP3-205ENST00000417664 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
SSBP3-205ENST00000417664 PDZRN3Q9UPQ7 1066 aa21.15■□□□□ 0.98
SSBP3-205ENST00000417664 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
SSBP3-205ENST00000417664 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
SSBP3-205ENST00000417664 MRC1P22897 1456 aa21.13■□□□□ 0.97
SSBP3-205ENST00000417664 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
SSBP3-205ENST00000417664 G2E3Q7L622 706 aa21.13■□□□□ 0.97
SSBP3-205ENST00000417664 COL22A1Q8NFW1 1626 aaPredicted RBP21.13■□□□□ 0.97
SSBP3-205ENST00000417664 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
SSBP3-205ENST00000417664 EVA1CP58658 441 aa21.12■□□□□ 0.97
SSBP3-205ENST00000417664 FKBP5Q13451 457 aaPredicted RBP21.12■□□□□ 0.97
SSBP3-205ENST00000417664 PCDH11XQ9BZA7 1347 aa21.11■□□□□ 0.97
SSBP3-205ENST00000417664 PCDH11YQ9BZA8 1340 aa21.11■□□□□ 0.97
SSBP3-205ENST00000417664 CYP27B1O15528 508 aa21.11■□□□□ 0.97
SSBP3-205ENST00000417664 RPAP2Q8IXW5 612 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-205ENST00000417664 KCNQ3O43525 872 aa21.1■□□□□ 0.97
SSBP3-205ENST00000417664 GIGYF1O75420 1035 aaPredicted RBP21.1■□□□□ 0.97
SSBP3-205ENST00000417664 ZCRB1Q8TBF4 217 aaKnown RBP21.1■□□□□ 0.97
SSBP3-205ENST00000417664 IL2RBP14784 551 aa21.09■□□□□ 0.97
SSBP3-205ENST00000417664 ZNF790Q6PG37 636 aa21.09■□□□□ 0.97
SSBP3-205ENST00000417664 DBF4Q9UBU7 674 aaPredicted RBP21.09■□□□□ 0.97
SSBP3-205ENST00000417664 COL14A1Q05707 1796 aaKnown RBP21.08■□□□□ 0.97
SSBP3-205ENST00000417664 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.96
SSBP3-205ENST00000417664 EIF2S2P20042 333 aaKnown RBP21.08■□□□□ 0.96
SSBP3-205ENST00000417664 NUCB1Q02818 461 aa21.08■□□□□ 0.96
SSBP3-205ENST00000417664 NECTIN2Q92692 538 aa21.08■□□□□ 0.96
SSBP3-205ENST00000417664 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
SSBP3-205ENST00000417664 F6X3S4 739 aa21.06■□□□□ 0.96
SSBP3-205ENST00000417664 GNAI3P08754 354 aa21.06■□□□□ 0.96
SSBP3-205ENST00000417664 NKX1-1Q15270 411 aaPredicted RBP21.06■□□□□ 0.96
SSBP3-205ENST00000417664 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
SSBP3-205ENST00000417664 C8orf34Q49A92 452 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
SSBP3-205ENST00000417664 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 C1orf115Q9H7X2 142 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 TOM1O60784 492 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
SSBP3-205ENST00000417664 STRN4Q9NRL3 753 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 ATP10DQ9P241 1426 aa21.05■□□□□ 0.96
SSBP3-205ENST00000417664 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
SSBP3-205ENST00000417664 MEIS3Q99687 375 aa21.04■□□□□ 0.96
SSBP3-205ENST00000417664 CABP4P57796 275 aa21.03■□□□□ 0.96
SSBP3-205ENST00000417664 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
SSBP3-205ENST00000417664 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
SSBP3-205ENST00000417664 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
SSBP3-205ENST00000417664 HMMRO75330 724 aa21.02■□□□□ 0.96
SSBP3-205ENST00000417664 CEP85Q6P2H3 762 aa21.02■□□□□ 0.96
SSBP3-205ENST00000417664 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
SSBP3-205ENST00000417664 PHAXQ9H814 394 aaKnown RBP21.02■□□□□ 0.96
SSBP3-205ENST00000417664 GNAI2P04899 355 aa21.02■□□□□ 0.95
SSBP3-205ENST00000417664 DCTPP1Q9H773 170 aa21.02■□□□□ 0.95
SSBP3-205ENST00000417664 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSBP3-205ENST00000417664 PHLPP1O60346 1717 aa21.01■□□□□ 0.95
SSBP3-205ENST00000417664 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
SSBP3-205ENST00000417664 FMNL2Q96PY5 1086 aa21■□□□□ 0.95
SSBP3-205ENST00000417664 SNRPA1P09661 255 aaKnown RBP20.99■□□□□ 0.95
SSBP3-205ENST00000417664 DNAAF4Q8WXU2 420 aa20.99■□□□□ 0.95
SSBP3-205ENST00000417664 SRCIN1Q9C0H9 1055 aa20.99■□□□□ 0.95
SSBP3-205ENST00000417664 SLC39A6Q13433 755 aa20.99■□□□□ 0.95
SSBP3-205ENST00000417664 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
SSBP3-205ENST00000417664 DDX58O95786 925 aaKnown RBP20.97■□□□□ 0.95
SSBP3-205ENST00000417664 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
SSBP3-205ENST00000417664 PI4KAP2A4QPH2 592 aa20.96■□□□□ 0.95
SSBP3-205ENST00000417664 PI4KAP1Q8N8J0 262 aa20.96■□□□□ 0.95
SSBP3-205ENST00000417664 SHANK3Q9BYB0 1731 aa20.96■□□□□ 0.95
SSBP3-205ENST00000417664 IBTKQ9P2D0 1353 aaPredicted RBP20.96■□□□□ 0.95
SSBP3-205ENST00000417664 KSR2Q6VAB6 950 aa20.96■□□□□ 0.95
SSBP3-205ENST00000417664 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
SSBP3-205ENST00000417664 DISP2A7MBM2 1401 aa20.95■□□□□ 0.94
SSBP3-205ENST00000417664 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
SSBP3-205ENST00000417664 USP44Q9H0E7 712 aa20.95■□□□□ 0.94
SSBP3-205ENST00000417664 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
SSBP3-205ENST00000417664 HDAC5Q9UQL6 1122 aa20.95■□□□□ 0.94
SSBP3-205ENST00000417664 PLCH1Q4KWH8 1693 aa20.95■□□□□ 0.94
SSBP3-205ENST00000417664 ADCY9O60503 1353 aa20.94■□□□□ 0.94
SSBP3-205ENST00000417664 ALDH1L1O75891 902 aa20.94■□□□□ 0.94
SSBP3-205ENST00000417664 UBTFL1P0CB47 393 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms