RNA–Protein interactions for RNA: ENST00000416427.5

RANBP1-204, Transcript of RAN binding protein 1, humanhuman

TSL 5

Gene RANBP1, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-204ENST00000416427 CHD4Q14839 1912 aa34.12■■■■□ 3.05
RANBP1-204ENST00000416427 KDM6AO15550 1401 aaPredicted RBP34.12■■■■□ 3.05
RANBP1-204ENST00000416427 GOLGB1Q14789 3259 aaKnown RBP34.12■■■■□ 3.05
RANBP1-204ENST00000416427 ATP6V1AP38606 617 aa34.11■■■■□ 3.05
RANBP1-204ENST00000416427 AMOTQ4VCS5 1084 aa34.11■■■■□ 3.05
RANBP1-204ENST00000416427 PELP1Q8IZL8 1130 aaKnown RBP34.11■■■■□ 3.05
RANBP1-204ENST00000416427 DCAF5Q96JK2 942 aa34.11■■■■□ 3.05
RANBP1-204ENST00000416427 HSP90AB1P08238 724 aaKnown RBP34.1■■■■□ 3.05
RANBP1-204ENST00000416427 PER1O15534 1290 aaPredicted RBP34.09■■■■□ 3.05
RANBP1-204ENST00000416427 MTHFSP49914 203 aa34.09■■■■□ 3.05
RANBP1-204ENST00000416427 GPR162Q16538 588 aa34.09■■■■□ 3.05
RANBP1-204ENST00000416427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.08■■■■□ 3.05
RANBP1-204ENST00000416427 ERVV-2B6SEH9 535 aa34.08■■■■□ 3.05
RANBP1-204ENST00000416427 C1orf141Q5JVX7 400 aa34.07■■■■□ 3.04
RANBP1-204ENST00000416427 KDRP35968 1356 aa34.07■■■■□ 3.04
RANBP1-204ENST00000416427 CABP4P57796 275 aa34.06■■■■□ 3.04
RANBP1-204ENST00000416427 GNPATO15228 680 aa34.05■■■■□ 3.04
RANBP1-204ENST00000416427 RBM42Q9BTD8 480 aaKnown RBP34.05■■■■□ 3.04
RANBP1-204ENST00000416427 SCN11AQ9UI33 1791 aa34.03■■■■□ 3.04
RANBP1-204ENST00000416427 HMOX1P09601 288 aa34.02■■■■□ 3.04
RANBP1-204ENST00000416427 SSFA2P28290 1259 aa34.02■■■■□ 3.04
RANBP1-204ENST00000416427 SLC4A9Q96Q91 983 aa34.02■■■■□ 3.04
RANBP1-204ENST00000416427 COL5A3P25940 1745 aaPredicted RBP34.01■■■■□ 3.04
RANBP1-204ENST00000416427 VIRMAQ69YN4 1812 aaKnown RBP34■■■■□ 3.03
RANBP1-204ENST00000416427 ZNF831Q5JPB2 1677 aa33.99■■■■□ 3.03
RANBP1-204ENST00000416427 NFATC2IPQ8NCF5 419 aa33.97■■■■□ 3.03
RANBP1-204ENST00000416427 DIAPH1O60610 1272 aaKnown RBP33.95■■■■□ 3.03
RANBP1-204ENST00000416427 PTCD1O75127 700 aaKnown RBP33.95■■■■□ 3.03
RANBP1-204ENST00000416427 ZNF784Q8NCA9 323 aaPredicted RBP33.93■■■■□ 3.02
RANBP1-204ENST00000416427 YBX3P16989 372 aaKnown RBP eCLIP33.92■■■■□ 3.021e-37■□□□□ 10.1
RANBP1-204ENST00000416427 RTCBQ9Y3I0 505 aaKnown RBP33.92■■■■□ 3.02
RANBP1-204ENST00000416427 MYH14Q7Z406 1995 aaKnown RBP33.92■■■■□ 3.02
RANBP1-204ENST00000416427 AKAP4Q5JQC9 854 aa33.91■■■■□ 3.02
RANBP1-204ENST00000416427 CD2APQ9Y5K6 639 aa33.91■■■■□ 3.02
RANBP1-204ENST00000416427 NPC1L1Q9UHC9 1359 aa33.9■■■■□ 3.02
RANBP1-204ENST00000416427 TJP1Q07157 1748 aa33.9■■■■□ 3.02
RANBP1-204ENST00000416427 COL3A1P02461 1466 aaPredicted RBP33.89■■■■□ 3.02
RANBP1-204ENST00000416427 LGR6Q9HBX8 967 aa33.89■■■■□ 3.02
RANBP1-204ENST00000416427 TRAPPC3LQ5T215 181 aa33.88■■■■□ 3.01
RANBP1-204ENST00000416427 C4AP0C0L4 1744 aa33.87■■■■□ 3.01
RANBP1-204ENST00000416427 CNTNAP4Q9C0A0 1308 aa33.86■■■■□ 3.01
RANBP1-204ENST00000416427 U2SURPO15042 1029 aaKnown RBP33.86■■■■□ 3.01
RANBP1-204ENST00000416427 MTHFSDQ2M296 383 aaKnown RBP33.85■■■■□ 3.01
RANBP1-204ENST00000416427 RC3H1Q5TC82 1133 aaKnown RBP33.85■■■■□ 3.01
RANBP1-204ENST00000416427 WWC3Q9ULE0 1092 aa33.85■■■■□ 3.01
RANBP1-204ENST00000416427 SLC52A2Q9HAB3 445 aa33.84■■■■□ 3.01
RANBP1-204ENST00000416427 MMP10P09238 476 aa33.83■■■■□ 3.01
RANBP1-204ENST00000416427 ARHGEF1Q92888 912 aaKnown RBP33.83■■■■□ 3.01
RANBP1-204ENST00000416427 RNMTO43148 476 aaKnown RBP33.82■■■■□ 3
RANBP1-204ENST00000416427 RPS6KA4O75676 772 aa33.82■■■■□ 3
RANBP1-204ENST00000416427 MRC1P22897 1456 aa33.82■■■■□ 3
RANBP1-204ENST00000416427 CICQ96RK0 1608 aaPredicted RBP33.81■■■■□ 3
RANBP1-204ENST00000416427 GRIN3BO60391 1043 aa33.8■■■■□ 3
RANBP1-204ENST00000416427 RFC4P35249 363 aa33.8■■■■□ 3
RANBP1-204ENST00000416427 CRKLP46109 303 aaKnown RBP33.8■■■■□ 3
RANBP1-204ENST00000416427 ADAMTS7Q9UKP4 1686 aa33.8■■■■□ 3
RANBP1-204ENST00000416427 ADRA2BP18089 450 aa33.79■■■■□ 3
RANBP1-204ENST00000416427 SLC39A6Q13433 755 aa33.79■■■■□ 3
RANBP1-204ENST00000416427 GYS1P13807 737 aa33.75■■■□□ 2.99
RANBP1-204ENST00000416427 NLGN1Q8N2Q7 840 aa33.75■■■□□ 2.99
RANBP1-204ENST00000416427 DNAJC10Q8IXB1 793 aa33.74■■■□□ 2.99
RANBP1-204ENST00000416427 N4BP2Q86UW6 1770 aaPredicted RBP33.74■■■□□ 2.99
RANBP1-204ENST00000416427 KIF13BQ9NQT8 1826 aa33.74■■■□□ 2.99
RANBP1-204ENST00000416427 SRP68Q9UHB9 627 aaKnown RBP33.73■■■□□ 2.99
RANBP1-204ENST00000416427 KCPQ6ZWJ8 1503 aa33.73■■■□□ 2.99
RANBP1-204ENST00000416427 KIAA1551Q9HCM1 1747 aa33.71■■■□□ 2.99
RANBP1-204ENST00000416427 CFAP53Q96M91 514 aa33.71■■■□□ 2.99
RANBP1-204ENST00000416427 INTS5Q6P9B9 1019 aaKnown RBP33.7■■■□□ 2.99
RANBP1-204ENST00000416427 UBR2Q8IWV8 1755 aa33.7■■■□□ 2.98
RANBP1-204ENST00000416427 CCDC87Q9NVE4 849 aa33.67■■■□□ 2.98
RANBP1-204ENST00000416427 PARP3Q9Y6F1 533 aa33.67■■■□□ 2.98
RANBP1-204ENST00000416427 PXDNLA1KZ92 1463 aa33.67■■■□□ 2.98
RANBP1-204ENST00000416427 PPP2R1AP30153 589 aa33.66■■■□□ 2.98
RANBP1-204ENST00000416427 C10orf71Q711Q0 1435 aa33.66■■■□□ 2.98
RANBP1-204ENST00000416427 GAS2L2Q8NHY3 880 aa33.66■■■□□ 2.98
RANBP1-204ENST00000416427 USP42Q9H9J4 1324 aaKnown RBP33.66■■■□□ 2.98
RANBP1-204ENST00000416427 SIPA1L3O60292 1781 aaPredicted RBP33.65■■■□□ 2.98
RANBP1-204ENST00000416427 GNAT3A8MTJ3 354 aa33.64■■■□□ 2.98
RANBP1-204ENST00000416427 CYP19A1P11511 503 aaPredicted RBP33.64■■■□□ 2.98
RANBP1-204ENST00000416427 PRKAR2BP31323 418 aa33.64■■■□□ 2.98
RANBP1-204ENST00000416427 FKBP8Q14318 412 aa33.64■■■□□ 2.98
RANBP1-204ENST00000416427 TEFQ10587 303 aa33.63■■■□□ 2.97
RANBP1-204ENST00000416427 IL17REQ8NFR9 667 aa33.63■■■□□ 2.97
RANBP1-204ENST00000416427 PHACTR3Q96KR7 559 aa33.63■■■□□ 2.97
RANBP1-204ENST00000416427 A0A0G2JLW4 131 aa33.62■■■□□ 2.97
RANBP1-204ENST00000416427 TTC5Q8N0Z6 440 aa33.62■■■□□ 2.97
RANBP1-204ENST00000416427 RSPH6AQ9H0K4 717 aa33.62■■■□□ 2.97
RANBP1-204ENST00000416427 SOS1Q07889 1333 aaPredicted RBP33.6■■■□□ 2.97
RANBP1-204ENST00000416427 NUDCQ9Y266 331 aa33.6■■■□□ 2.97
RANBP1-204ENST00000416427 ZBTB1Q9Y2K1 713 aa33.6■■■□□ 2.97
RANBP1-204ENST00000416427 U2AF1L5P0DN76 240 aaPredicted RBP33.59■■■□□ 2.97
RANBP1-204ENST00000416427 U2AF1Q01081 240 aaKnown RBP eCLIP33.59■■■□□ 2.97
RANBP1-204ENST00000416427 TGFB2P61812 414 aa33.58■■■□□ 2.97
RANBP1-204ENST00000416427 DDR1Q08345 913 aa33.58■■■□□ 2.97
RANBP1-204ENST00000416427 USPL1Q5W0Q7 1092 aa33.58■■■□□ 2.97
RANBP1-204ENST00000416427 ATP10DQ9P241 1426 aa33.58■■■□□ 2.97
RANBP1-204ENST00000416427 ZPR1O75312 459 aa33.57■■■□□ 2.96
RANBP1-204ENST00000416427 COL15A1P39059 1388 aa33.57■■■□□ 2.96
RANBP1-204ENST00000416427 BRCA1P38398 1863 aaKnown RBP33.56■■■□□ 2.96
RANBP1-204ENST00000416427 DPEP1P16444 411 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms