RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
SBDSP1-201ENST00000415772 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
SBDSP1-201ENST00000415772 ITPK1Q13572 414 aa21.35■■□□□ 1.01
SBDSP1-201ENST00000415772 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
SBDSP1-201ENST00000415772 AMIGO3Q86WK7 504 aa21.35■■□□□ 1.01
SBDSP1-201ENST00000415772 EIF4G2P78344 907 aaKnown RBP eCLIP21.34■■□□□ 1.01
SBDSP1-201ENST00000415772 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
SBDSP1-201ENST00000415772 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
SBDSP1-201ENST00000415772 ERVV-2B6SEH9 535 aa21.33■■□□□ 1.01
SBDSP1-201ENST00000415772 CABP4P57796 275 aa21.33■■□□□ 1.01
SBDSP1-201ENST00000415772 DCAF5Q96JK2 942 aa21.33■■□□□ 1.01
SBDSP1-201ENST00000415772 PLEKHG2Q9H7P9 1386 aa21.33■■□□□ 1
SBDSP1-201ENST00000415772 MMP10P09238 476 aa21.32■■□□□ 1
SBDSP1-201ENST00000415772 C1orf141Q5JVX7 400 aa21.32■■□□□ 1
SBDSP1-201ENST00000415772 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
SBDSP1-201ENST00000415772 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
SBDSP1-201ENST00000415772 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
SBDSP1-201ENST00000415772 RFC4P35249 363 aa21.3■■□□□ 1
SBDSP1-201ENST00000415772 MORC1Q86VD1 984 aa21.3■■□□□ 1
SBDSP1-201ENST00000415772 PANK3Q9H999 370 aa21.3■■□□□ 1
SBDSP1-201ENST00000415772 GOLGB1Q14789 3259 aaKnown RBP21.29■■□□□ 1
SBDSP1-201ENST00000415772 MTHFSP49914 203 aa21.28■■□□□ 1
SBDSP1-201ENST00000415772 CCDC87Q9NVE4 849 aa21.28■■□□□ 1
SBDSP1-201ENST00000415772 PARP3Q9Y6F1 533 aa21.28■■□□□ 1
SBDSP1-201ENST00000415772 HSPA5P11021 654 aaKnown RBP21.27■■□□□ 1
SBDSP1-201ENST00000415772 ADRA2BP18089 450 aa21.27■■□□□ 1
SBDSP1-201ENST00000415772 BCS1LQ9Y276 419 aa21.27■■□□□ 1
SBDSP1-201ENST00000415772 TGFB2P61812 414 aa21.26■□□□□ 0.99
SBDSP1-201ENST00000415772 RC3H1Q5TC82 1133 aaKnown RBP21.26■□□□□ 0.99
SBDSP1-201ENST00000415772 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
SBDSP1-201ENST00000415772 ADCY9O60503 1353 aa21.25■□□□□ 0.99
SBDSP1-201ENST00000415772 KDRP35968 1356 aa21.25■□□□□ 0.99
SBDSP1-201ENST00000415772 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
SBDSP1-201ENST00000415772 ARHGEF1Q92888 912 aaKnown RBP21.25■□□□□ 0.99
SBDSP1-201ENST00000415772 KNSTRNQ9Y448 316 aa21.25■□□□□ 0.99
SBDSP1-201ENST00000415772 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
SBDSP1-201ENST00000415772 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
SBDSP1-201ENST00000415772 ZNF831Q5JPB2 1677 aa21.22■□□□□ 0.99
SBDSP1-201ENST00000415772 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
SBDSP1-201ENST00000415772 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
SBDSP1-201ENST00000415772 ARHGAP27Q6ZUM4 889 aa21.22■□□□□ 0.99
SBDSP1-201ENST00000415772 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
SBDSP1-201ENST00000415772 FCHSD2O94868 740 aa21.21■□□□□ 0.99
SBDSP1-201ENST00000415772 HSPA6P17066 643 aa21.21■□□□□ 0.99
SBDSP1-201ENST00000415772 SLC4A9Q96Q91 983 aa21.21■□□□□ 0.99
SBDSP1-201ENST00000415772 KDM6AO15550 1401 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-201ENST00000415772 GYS1P13807 737 aa21.2■□□□□ 0.98
SBDSP1-201ENST00000415772 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
SBDSP1-201ENST00000415772 NFATC2IPQ8NCF5 419 aa21.2■□□□□ 0.98
SBDSP1-201ENST00000415772 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
SBDSP1-201ENST00000415772 C4AP0C0L4 1744 aa21.19■□□□□ 0.98
SBDSP1-201ENST00000415772 COL5A3P25940 1745 aaPredicted RBP21.19■□□□□ 0.98
SBDSP1-201ENST00000415772 N4BP2Q86UW6 1770 aaPredicted RBP21.19■□□□□ 0.98
SBDSP1-201ENST00000415772 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
SBDSP1-201ENST00000415772 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
SBDSP1-201ENST00000415772 DPEP1P16444 411 aa21.17■□□□□ 0.98
SBDSP1-201ENST00000415772 KIF13BQ9NQT8 1826 aa21.17■□□□□ 0.98
SBDSP1-201ENST00000415772 PIM2Q9P1W9 311 aa21.15■□□□□ 0.98
SBDSP1-201ENST00000415772 ZPR1O75312 459 aa21.14■□□□□ 0.97
SBDSP1-201ENST00000415772 AKAP4Q5JQC9 854 aa21.14■□□□□ 0.97
SBDSP1-201ENST00000415772 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
SBDSP1-201ENST00000415772 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
SBDSP1-201ENST00000415772 USP42Q9H9J4 1324 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-201ENST00000415772 KIF3CO14782 793 aa21.12■□□□□ 0.97
SBDSP1-201ENST00000415772 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
SBDSP1-201ENST00000415772 IL13P35225 146 aa21.11■□□□□ 0.97
SBDSP1-201ENST00000415772 DALRD3Q5D0E6 543 aaKnown RBP21.11■□□□□ 0.97
SBDSP1-201ENST00000415772 IFFO2Q5TF58 517 aa21.11■□□□□ 0.97
SBDSP1-201ENST00000415772 TOMM70O94826 608 aa21.1■□□□□ 0.97
SBDSP1-201ENST00000415772 FKBP8Q14318 412 aa21.1■□□□□ 0.97
SBDSP1-201ENST00000415772 HMOX1P09601 288 aa21.09■□□□□ 0.97
SBDSP1-201ENST00000415772 APLP1P51693 650 aa21.09■□□□□ 0.97
SBDSP1-201ENST00000415772 C9orf131Q5VYM1 1079 aa21.09■□□□□ 0.97
SBDSP1-201ENST00000415772 SLC52A2Q9HAB3 445 aa21.09■□□□□ 0.97
SBDSP1-201ENST00000415772 TJP1Q07157 1748 aa21.09■□□□□ 0.97
SBDSP1-201ENST00000415772 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
SBDSP1-201ENST00000415772 DNAJC10Q8IXB1 793 aa21.08■□□□□ 0.97
SBDSP1-201ENST00000415772 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
SBDSP1-201ENST00000415772 MYH14Q7Z406 1995 aaKnown RBP21.06■□□□□ 0.96
SBDSP1-201ENST00000415772 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
SBDSP1-201ENST00000415772 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
SBDSP1-201ENST00000415772 RNF181Q9P0P0 153 aa21.06■□□□□ 0.96
SBDSP1-201ENST00000415772 RNMTO43148 476 aaKnown RBP21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 DIAPH1O60610 1272 aaKnown RBP21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 DDR1Q08345 913 aa21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 TTC5Q8N0Z6 440 aa21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
SBDSP1-201ENST00000415772 KCNA3P22001 575 aa21.04■□□□□ 0.96
SBDSP1-201ENST00000415772 CHRNA5P30532 468 aa21.04■□□□□ 0.96
SBDSP1-201ENST00000415772 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
SBDSP1-201ENST00000415772 ARFGEF1Q9Y6D6 1849 aa21.04■□□□□ 0.96
SBDSP1-201ENST00000415772 POLRMTO00411 1230 aaKnown RBP21.03■□□□□ 0.96
SBDSP1-201ENST00000415772 AMER1Q5JTC6 1135 aaPredicted RBP21.03■□□□□ 0.96
SBDSP1-201ENST00000415772 CC2D1BQ5T0F9 858 aaKnown RBP21.03■□□□□ 0.96
SBDSP1-201ENST00000415772 BRCA1P38398 1863 aaKnown RBP21.03■□□□□ 0.96
SBDSP1-201ENST00000415772 SOS1Q07889 1333 aaPredicted RBP21.03■□□□□ 0.96
SBDSP1-201ENST00000415772 COL15A1P39059 1388 aa21.02■□□□□ 0.96
SBDSP1-201ENST00000415772 CYP19A1P11511 503 aaPredicted RBP21.02■□□□□ 0.96
SBDSP1-201ENST00000415772 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms