RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
HNF4A-204ENST00000415691 GJD4Q96KN9 370 aaPredicted RBP16.64■□□□□ 0.25
HNF4A-204ENST00000415691 LGR6Q9HBX8 967 aa16.64■□□□□ 0.25
HNF4A-204ENST00000415691 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
HNF4A-204ENST00000415691 OVOS2A0A0G2JMS6 1433 aa16.64■□□□□ 0.25
HNF4A-204ENST00000415691 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
HNF4A-204ENST00000415691 RGS3P49796 1198 aa16.64■□□□□ 0.25
HNF4A-204ENST00000415691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.25
HNF4A-204ENST00000415691 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
HNF4A-204ENST00000415691 DISP2A7MBM2 1401 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 MRE11P49959 708 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
HNF4A-204ENST00000415691 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
HNF4A-204ENST00000415691 PHKG2P15735 406 aa16.62■□□□□ 0.25
HNF4A-204ENST00000415691 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
HNF4A-204ENST00000415691 EXOC5O00471 708 aa16.62■□□□□ 0.25
HNF4A-204ENST00000415691 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
HNF4A-204ENST00000415691 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
HNF4A-204ENST00000415691 ATRNO75882 1429 aa16.61■□□□□ 0.25
HNF4A-204ENST00000415691 MAP3K5Q99683 1374 aa16.61■□□□□ 0.25
HNF4A-204ENST00000415691 TPM2P07951 284 aa16.61■□□□□ 0.25
HNF4A-204ENST00000415691 RGS17Q9UGC6 210 aaPredicted RBP16.61■□□□□ 0.25
HNF4A-204ENST00000415691 WDR63Q8IWG1 891 aa16.61■□□□□ 0.25
HNF4A-204ENST00000415691 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
HNF4A-204ENST00000415691 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
HNF4A-204ENST00000415691 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
HNF4A-204ENST00000415691 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.59■□□□□ 0.25
HNF4A-204ENST00000415691 A0A0G2JS52 829 aa16.59■□□□□ 0.25
HNF4A-204ENST00000415691 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
HNF4A-204ENST00000415691 SLFN5Q08AF3 891 aa16.59■□□□□ 0.25
HNF4A-204ENST00000415691 DDB1Q16531 1140 aa16.59■□□□□ 0.25
HNF4A-204ENST00000415691 RNMTO43148 476 aaKnown RBP16.58■□□□□ 0.25
HNF4A-204ENST00000415691 MCM4P33991 863 aa16.58■□□□□ 0.25
HNF4A-204ENST00000415691 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.25
HNF4A-204ENST00000415691 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.25
HNF4A-204ENST00000415691 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.25
HNF4A-204ENST00000415691 TRMT2AQ8IZ69 625 aaKnown RBP16.58■□□□□ 0.24
HNF4A-204ENST00000415691 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
HNF4A-204ENST00000415691 GLI3P10071 1580 aa16.58■□□□□ 0.24
HNF4A-204ENST00000415691 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
HNF4A-204ENST00000415691 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
HNF4A-204ENST00000415691 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
HNF4A-204ENST00000415691 PDCL3Q9H2J4 239 aa16.57■□□□□ 0.24
HNF4A-204ENST00000415691 ESPNB1AK53 854 aa16.57■□□□□ 0.24
HNF4A-204ENST00000415691 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
HNF4A-204ENST00000415691 MARCH10Q8NA82 808 aaPredicted RBP16.56■□□□□ 0.24
HNF4A-204ENST00000415691 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
HNF4A-204ENST00000415691 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
HNF4A-204ENST00000415691 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
HNF4A-204ENST00000415691 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
HNF4A-204ENST00000415691 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
HNF4A-204ENST00000415691 POTEAQ6S8J7 498 aa16.55■□□□□ 0.24
HNF4A-204ENST00000415691 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
HNF4A-204ENST00000415691 E9PSI1 815 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
HNF4A-204ENST00000415691 SEPT12Q8IYM1 358 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 PANK2Q9BZ23 570 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 AAMPQ13685 434 aa16.54■□□□□ 0.24
HNF4A-204ENST00000415691 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 IL16Q14005 1332 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 SEC24BO95487 1268 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
HNF4A-204ENST00000415691 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
HNF4A-204ENST00000415691 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
HNF4A-204ENST00000415691 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
HNF4A-204ENST00000415691 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
HNF4A-204ENST00000415691 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
HNF4A-204ENST00000415691 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
HNF4A-204ENST00000415691 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
HNF4A-204ENST00000415691 CHL1O00533 1208 aa16.52■□□□□ 0.23
HNF4A-204ENST00000415691 TEFQ10587 303 aa16.52■□□□□ 0.23
HNF4A-204ENST00000415691 GNAI1P63096 354 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 CHMP5Q9NZZ3 219 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 TRAK2O60296 914 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 IGHDP01880 384 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 RXRBP28702 533 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 SLC52A2Q9HAB3 445 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
HNF4A-204ENST00000415691 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
HNF4A-204ENST00000415691 KCNQ3O43525 872 aa16.5■□□□□ 0.23
HNF4A-204ENST00000415691 CABP4P57796 275 aa16.5■□□□□ 0.23
HNF4A-204ENST00000415691 TSPYL4Q9UJ04 414 aa16.5■□□□□ 0.23
HNF4A-204ENST00000415691 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
HNF4A-204ENST00000415691 TERF1P54274 439 aa16.49■□□□□ 0.23
HNF4A-204ENST00000415691 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
HNF4A-204ENST00000415691 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms