RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 GNAI2P04899 355 aa20.47■□□□□ 0.87
PPP6R1-201ENST00000412770 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
PPP6R1-201ENST00000412770 SSH2Q76I76 1423 aa20.46■□□□□ 0.87
PPP6R1-201ENST00000412770 SETD1AO15047 1707 aaKnown RBP20.46■□□□□ 0.87
PPP6R1-201ENST00000412770 PCDHB15Q9Y5E8 787 aa20.46■□□□□ 0.87
PPP6R1-201ENST00000412770 KCNQ3O43525 872 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 XRN1Q8IZH2 1706 aaKnown RBP20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 USP19O94966 1318 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 G2E3Q7L622 706 aa20.45■□□□□ 0.86
PPP6R1-201ENST00000412770 IGHDP01880 384 aa20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 PHKG2P15735 406 aa20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 DDB1Q16531 1140 aa20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
PPP6R1-201ENST00000412770 PIP4K2AP48426 406 aaPredicted RBP20.43■□□□□ 0.86
PPP6R1-201ENST00000412770 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
PPP6R1-201ENST00000412770 FAM161AQ3B820 660 aa20.43■□□□□ 0.86
PPP6R1-201ENST00000412770 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
PPP6R1-201ENST00000412770 HSP90AA1P07900 732 aaKnown RBP20.42■□□□□ 0.86
PPP6R1-201ENST00000412770 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
PPP6R1-201ENST00000412770 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
PPP6R1-201ENST00000412770 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
PPP6R1-201ENST00000412770 BABAM1Q9NWV8 329 aa20.42■□□□□ 0.86
PPP6R1-201ENST00000412770 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 ACSBG1Q96GR2 724 aa20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
PPP6R1-201ENST00000412770 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
PPP6R1-201ENST00000412770 EIF4A1P60842 406 aaKnown RBP20.4■□□□□ 0.86
PPP6R1-201ENST00000412770 MEIS3Q99687 375 aa20.39■□□□□ 0.86
PPP6R1-201ENST00000412770 TRIM6-TRIM34B2RNG4 842 aa20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 MFAP1P55081 439 aaKnown RBP20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 IQSEC2Q5JU85 1478 aa20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 STARD3NLO95772 234 aa20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 KDRP35968 1356 aa20.39■□□□□ 0.85
PPP6R1-201ENST00000412770 GTF2E1P29083 439 aaPredicted RBP20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 GCC1Q96CN9 775 aa20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 FMN2Q9NZ56 1722 aa20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 RGPD8O14715 1765 aaPredicted RBP20.38■□□□□ 0.85
PPP6R1-201ENST00000412770 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
PPP6R1-201ENST00000412770 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
PPP6R1-201ENST00000412770 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
PPP6R1-201ENST00000412770 MYD88Q99836 296 aa20.36■□□□□ 0.85
PPP6R1-201ENST00000412770 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
PPP6R1-201ENST00000412770 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
PPP6R1-201ENST00000412770 XAGE3Q8WTP9 111 aa20.36■□□□□ 0.85
PPP6R1-201ENST00000412770 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
PPP6R1-201ENST00000412770 SRGAP3O43295 1099 aa20.35■□□□□ 0.85
PPP6R1-201ENST00000412770 LRRFIP2Q9Y608 721 aaKnown RBP20.35■□□□□ 0.85
PPP6R1-201ENST00000412770 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
PPP6R1-201ENST00000412770 G3BP1Q13283 466 aaKnown RBP eCLIP20.34■□□□□ 0.851e-6■■■□□ 18.6
PPP6R1-201ENST00000412770 ZBTB40Q9NUA8 1239 aa20.34■□□□□ 0.85
PPP6R1-201ENST00000412770 CYP27B1O15528 508 aa20.34■□□□□ 0.85
PPP6R1-201ENST00000412770 ZBTB3Q9H5J0 574 aa20.34■□□□□ 0.85
PPP6R1-201ENST00000412770 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
PPP6R1-201ENST00000412770 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
PPP6R1-201ENST00000412770 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.84
PPP6R1-201ENST00000412770 BECN1Q14457 450 aa20.33■□□□□ 0.84
PPP6R1-201ENST00000412770 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
PPP6R1-201ENST00000412770 HOXB7P09629 217 aa20.32■□□□□ 0.84
PPP6R1-201ENST00000412770 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
PPP6R1-201ENST00000412770 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
PPP6R1-201ENST00000412770 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
PPP6R1-201ENST00000412770 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
PPP6R1-201ENST00000412770 ANKRD13DQ6ZTN6 518 aa20.31■□□□□ 0.84
PPP6R1-201ENST00000412770 ZBTB7BO15156 539 aaPredicted RBP20.31■□□□□ 0.84
PPP6R1-201ENST00000412770 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
PPP6R1-201ENST00000412770 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
PPP6R1-201ENST00000412770 GORABQ5T7V8 394 aa20.3■□□□□ 0.84
PPP6R1-201ENST00000412770 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
PPP6R1-201ENST00000412770 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 KSR2Q6VAB6 950 aa20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 CDCA7Q9BWT1 371 aaPredicted RBP20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 USP21Q9UK80 565 aa20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 SIL1Q9H173 461 aa20.29■□□□□ 0.84
PPP6R1-201ENST00000412770 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
PPP6R1-201ENST00000412770 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
PPP6R1-201ENST00000412770 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
PPP6R1-201ENST00000412770 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
PPP6R1-201ENST00000412770 USP16Q9Y5T5 823 aa20.28■□□□□ 0.84
PPP6R1-201ENST00000412770 ERVV-2B6SEH9 535 aa20.27■□□□□ 0.84
PPP6R1-201ENST00000412770 SMARCA5O60264 1052 aaPredicted RBP20.27■□□□□ 0.84
PPP6R1-201ENST00000412770 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.84
PPP6R1-201ENST00000412770 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms