RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ITPK1Q13572 414 aa13.63□□□□□ -0.23
PKP4-203ENST00000411900 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
PKP4-203ENST00000411900 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
PKP4-203ENST00000411900 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
PKP4-203ENST00000411900 CABP4P57796 275 aa13.62□□□□□ -0.23
PKP4-203ENST00000411900 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
PKP4-203ENST00000411900 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
PKP4-203ENST00000411900 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
PKP4-203ENST00000411900 KDRP35968 1356 aa13.61□□□□□ -0.23
PKP4-203ENST00000411900 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
PKP4-203ENST00000411900 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
PKP4-203ENST00000411900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
PKP4-203ENST00000411900 GNPATO15228 680 aa13.6□□□□□ -0.23
PKP4-203ENST00000411900 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
PKP4-203ENST00000411900 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
PKP4-203ENST00000411900 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
PKP4-203ENST00000411900 FLAD1Q8NFF5 587 aa13.59□□□□□ -0.23
PKP4-203ENST00000411900 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
PKP4-203ENST00000411900 UTRNP46939 3433 aa13.59□□□□□ -0.23
PKP4-203ENST00000411900 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
PKP4-203ENST00000411900 MAP3K5Q99683 1374 aa13.58□□□□□ -0.23
PKP4-203ENST00000411900 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
PKP4-203ENST00000411900 HMGB2P26583 209 aaKnown RBP13.58□□□□□ -0.24
PKP4-203ENST00000411900 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
PKP4-203ENST00000411900 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.24
PKP4-203ENST00000411900 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.24
PKP4-203ENST00000411900 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
PKP4-203ENST00000411900 GPR162Q16538 588 aa13.57□□□□□ -0.24
PKP4-203ENST00000411900 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
PKP4-203ENST00000411900 CHD4Q14839 1912 aa13.56□□□□□ -0.24
PKP4-203ENST00000411900 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
PKP4-203ENST00000411900 MYH14Q7Z406 1995 aaKnown RBP13.56□□□□□ -0.24
PKP4-203ENST00000411900 SSFA2P28290 1259 aa13.56□□□□□ -0.24
PKP4-203ENST00000411900 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
PKP4-203ENST00000411900 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
PKP4-203ENST00000411900 TJP1Q07157 1748 aa13.56□□□□□ -0.24
PKP4-203ENST00000411900 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
PKP4-203ENST00000411900 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
PKP4-203ENST00000411900 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
PKP4-203ENST00000411900 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
PKP4-203ENST00000411900 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
PKP4-203ENST00000411900 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
PKP4-203ENST00000411900 WWC3Q9ULE0 1092 aa13.53□□□□□ -0.24
PKP4-203ENST00000411900 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.25
PKP4-203ENST00000411900 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
PKP4-203ENST00000411900 MRC1P22897 1456 aa13.51□□□□□ -0.25
PKP4-203ENST00000411900 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
PKP4-203ENST00000411900 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
PKP4-203ENST00000411900 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
PKP4-203ENST00000411900 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
PKP4-203ENST00000411900 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
PKP4-203ENST00000411900 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
PKP4-203ENST00000411900 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
PKP4-203ENST00000411900 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 MMP10P09238 476 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 RFC4P35249 363 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
PKP4-203ENST00000411900 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
PKP4-203ENST00000411900 PHACTR3Q96KR7 559 aa13.48□□□□□ -0.25
PKP4-203ENST00000411900 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
PKP4-203ENST00000411900 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
PKP4-203ENST00000411900 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
PKP4-203ENST00000411900 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
PKP4-203ENST00000411900 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
PKP4-203ENST00000411900 GYS1P13807 737 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 ADRA2BP18089 450 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
PKP4-203ENST00000411900 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
PKP4-203ENST00000411900 ZNF784Q8NCA9 323 aaPredicted RBP13.47□□□□□ -0.25
PKP4-203ENST00000411900 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
PKP4-203ENST00000411900 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
PKP4-203ENST00000411900 TEFQ10587 303 aa13.45□□□□□ -0.26
PKP4-203ENST00000411900 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
PKP4-203ENST00000411900 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
PKP4-203ENST00000411900 KIF13BQ9NQT8 1826 aa13.45□□□□□ -0.26
PKP4-203ENST00000411900 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
PKP4-203ENST00000411900 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
PKP4-203ENST00000411900 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
PKP4-203ENST00000411900 FKBP8Q14318 412 aa13.44□□□□□ -0.26
PKP4-203ENST00000411900 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
PKP4-203ENST00000411900 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
PKP4-203ENST00000411900 PARP3Q9Y6F1 533 aa13.43□□□□□ -0.26
PKP4-203ENST00000411900 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
PKP4-203ENST00000411900 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
PKP4-203ENST00000411900 KCNQ3O43525 872 aa13.42□□□□□ -0.26
PKP4-203ENST00000411900 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
PKP4-203ENST00000411900 USPL1Q5W0Q7 1092 aa13.42□□□□□ -0.26
PKP4-203ENST00000411900 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
PKP4-203ENST00000411900 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
PKP4-203ENST00000411900 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
PKP4-203ENST00000411900 C10orf71Q711Q0 1435 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 A0A0G2JLW4 131 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 ZPR1O75312 459 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms