RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 ZNF837Q96EG3 531 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 TRERF1Q96PN7 1200 aa4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 GAS2L1Q99501 681 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 COL25A1Q9BXS0 654 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 FHDC1Q9C0D6 1143 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 HRH3Q9Y5N1 445 aa4.8□□□□□ -1.64
RNU6-1001P-201ENST00000411265 USP17L3A6NCW0 530 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 USP17L4A6NCW7 530 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 ATP9BO43861 1147 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 F11P03951 625 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 CSB-PGBD3P0DP91 1061 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 ATP1A2P50993 1020 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 GTF2IP78347 998 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 LBRQ14739 615 aaKnown RBP4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 HDGFL1Q5TGJ6 251 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 USP17L2Q6R6M4 530 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 USP17L1Q7RTZ2 530 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 PPARGC1BQ86YN6 1023 aaKnown RBP4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 PLEKHM2Q8IWE5 1019 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 PGBD3Q8N328 593 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 ADAMTS19Q8TE59 1207 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 CNTNAP3BQ96NU0 1288 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 CNTNAP3Q9BZ76 1288 aa4.79□□□□□ -1.64
RNU6-1001P-201ENST00000411265 BACH1O14867 736 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 PLA2G4AP47712 749 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 SMTNP53814 917 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 NBPF1Q3BBV0 1214 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 C4orf17Q53FE4 359 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 TBC1D9Q6ZT07 1266 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 FNBP4Q8N3X1 1017 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 GPR161Q8N6U8 529 aaKnown RBP4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 UCN2Q96RP3 112 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 NIFKQ9BYG3 293 aaKnown RBP4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 NUCKS1Q9H1E3 243 aaKnown RBP4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 GPAMQ9HCL2 828 aa4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 CUEDC1Q9NWM3 386 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1001P-201ENST00000411265 TMEM229AB2RXF0 380 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 STAU1O95793 577 aaKnown RBP4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 PHKA2P46019 1235 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 KRT76Q01546 638 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 EFHC2Q5JST6 749 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 RNFT1Q5M7Z0 435 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 DEPDC4Q8N2C3 294 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 C1orf216Q8TAB5 229 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CALR3Q96L12 384 aaKnown RBP4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SLC4A9Q96Q91 983 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MBIPQ9NS73 344 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SERTAD1Q9UHV2 236 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 NSFL1CQ9UNZ2 370 aaKnown RBP4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 PHF24Q9UPV7 400 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 RBM19Q9Y4C8 960 aaKnown RBP4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 PCDHGA11Q9Y5H2 935 aa4.77□□□□□ -1.65
RNU6-1001P-201ENST00000411265 A6NJY4 79 aa4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SRSF11Q05519 484 aaKnown RBP4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MTFR1Q15390 333 aa4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 DBN1Q16643 649 aa4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SVOPQ8N4V2 548 aa4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 TPCN2Q8NHX9 752 aa4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 GTPBP3Q969Y2 492 aaKnown RBP4.76□□□□□ -1.65
RNU6-1001P-201ENST00000411265 GPR25O00155 361 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CDK2AP1O14519 115 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ADAMTS2O95450 1211 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SLURP2P0DP57 97 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 TATP17735 454 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MAP3K10Q02779 954 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 GAS6Q14393 721 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 FIGNL1Q6PIW4 674 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CRISPLD1Q9H336 500 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 DNAAF2Q9NVR5 837 aaKnown RBP4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ZNF358Q9NW07 568 aa4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MAFBQ9Y5Q3 323 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1001P-201ENST00000411265 PALM3A6NDB9 673 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 RNF225M0QZC1 329 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MX2P20592 715 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MSX1P28360 303 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SIX5Q8N196 739 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 LARGE2Q8N3Y3 721 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 OGFOD1Q8N543 542 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 RUBCNLQ9H714 662 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ZDHHC3Q9NYG2 299 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CABP1Q9NZU7 370 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 SCHIP1Q9P0W5 487 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MKRN1Q9UHC7 482 aaKnown RBP4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CHMP3Q9Y3E7 222 aa4.74□□□□□ -1.65
RNU6-1001P-201ENST00000411265 M0R2N6 131 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ATP4AP20648 1035 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 MAP2K3P46734 347 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CLDN10P78369 228 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CCDC102BQ68D86 513 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 AIDAQ96BJ3 306 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ZNF594Q96JF6 807 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 CFHR5Q9BXR6 569 aa4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ATXN7L1Q9ULK2 861 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 IQSEC3Q9UPP2 1182 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1001P-201ENST00000411265 RASA1P20936 1047 aa4.72□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ARSJQ5FYB0 599 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1001P-201ENST00000411265 ZNF385CQ66K41 422 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1001P-201ENST00000411265 LARP1Q6PKG0 1096 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms