RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 INSM2Q96T92 566 aaPredicted RBP1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 ZCCHC4Q9H5U6 513 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 TMEM134Q9H6X4 195 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 RTEL1Q9NZ71 1219 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 USP21Q9UK80 565 aa1.25□□□□□ -2.21
RNU4-88P-201ENST00000411220 TRIOBPQ9H2D6 2365 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 CYSRT1A8MQ03 144 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 SLPIP03973 132 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 ERBB2P04626 1255 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 ARAFP10398 606 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 NBR1Q14596 966 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 ARID5BQ14865 1188 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 COL19A1Q14993 1142 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 PAXIP1Q6ZW49 1069 aaPredicted RBP1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 GPR20Q99678 358 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 CDCA7Q9BWT1 371 aaPredicted RBP1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 SCAND2PQ9GZW5 306 aaPredicted RBP1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 STK24Q9Y6E0 443 aa1.24□□□□□ -2.21
RNU4-88P-201ENST00000411220 FAM174AQ8TBP5 190 aa1.23□□□□□ -2.21
RNU4-88P-201ENST00000411220 FAM168AQ92567 244 aa1.23□□□□□ -2.21
RNU4-88P-201ENST00000411220 DDX12PQ92771 950 aa1.23□□□□□ -2.21
RNU4-88P-201ENST00000411220 CRISPLD2Q9H0B8 497 aa1.23□□□□□ -2.21
RNU4-88P-201ENST00000411220 C2CD2LO14523 706 aa1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 ATG9BQ674R7 924 aa1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 SHISA2Q6UWI4 295 aa1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 LYSMD3Q7Z3D4 306 aa1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 NUCKS1Q9H1E3 243 aaKnown RBP1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 DLL4Q9NR61 685 aa1.22□□□□□ -2.21
RNU4-88P-201ENST00000411220 PITPNM2Q9BZ72 1349 aa1.21□□□□□ -2.22
RNU4-88P-201ENST00000411220 ATP6V1AP38606 617 aa1.21□□□□□ -2.22
RNU4-88P-201ENST00000411220 EFEMP1Q12805 493 aa1.21□□□□□ -2.22
RNU4-88P-201ENST00000411220 PTCRAQ6ISU1 281 aaPredicted RBP1.21□□□□□ -2.22
RNU4-88P-201ENST00000411220 EMILIN1Q9Y6C2 1016 aa1.21□□□□□ -2.22
RNU4-88P-201ENST00000411220 LRRC10BA6NIK2 292 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 GRM5P41594 1212 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 GDF5P43026 501 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 GPR162Q16538 588 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 CIAPIN1Q6FI81 312 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 Q6ZVU0 165 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 WFDC12Q8WWY7 111 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 MEGF10Q96KG7 1140 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 EMILIN3Q9NT22 766 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 DYRK1BQ9Y463 629 aa1.2□□□□□ -2.22
RNU4-88P-201ENST00000411220 PRR19A6NJB7 356 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 RHOQP17081 205 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 FUT2Q10981 343 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 LINC01559Q495D7 138 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 PADI6Q6TGC4 694 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 GAS2L1Q99501 681 aaPredicted RBP1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 SEMA6CQ9H3T2 930 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 CCDC39Q9UFE4 941 aa1.19□□□□□ -2.22
RNU4-88P-201ENST00000411220 NPIPB6E9PJ23 425 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 CYR61O00622 381 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 ADH6P28332 368 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 IREB2P48200 963 aaKnown RBP1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 RELBQ01201 579 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 RSPH4AQ5TD94 716 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 AGBL5Q8NDL9 886 aa1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 RNF25Q96BH1 459 aaPredicted RBP1.18□□□□□ -2.22
RNU4-88P-201ENST00000411220 IRS2Q9Y4H2 1338 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 MATN3O15232 486 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 C1QTNF9P0C862 333 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 BMP7P18075 431 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 FOXD4L5Q5VV16 416 aaPredicted RBP1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 NFXL1Q6ZNB6 911 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 VSIG10LQ86VR7 867 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 ZFPM1Q8IX07 1006 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 C11orf21Q9P2W6 132 aa1.17□□□□□ -2.22
RNU4-88P-201ENST00000411220 NFIBO00712 420 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 NOS3P29474 1203 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 TRAPPC3LQ5T215 181 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 SYDE1Q6ZW31 735 aaPredicted RBP1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 PRICKLE2Q7Z3G6 844 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 FCHSD1Q86WN1 690 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 ZNF511Q8NB15 262 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 NELL2Q99435 816 aa1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 USB1Q9BQ65 265 aaKnown RBP1.16□□□□□ -2.22
RNU4-88P-201ENST00000411220 SMN1Q16637 294 aaKnown RBP1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 Q3C1V9 767 aa1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 BAP1Q92560 729 aa1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 PRDM6Q9NQX0 595 aa1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 ATXN7L1Q9ULK2 861 aaPredicted RBP1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 RAXQ9Y2V3 346 aa1.15□□□□□ -2.23
RNU4-88P-201ENST00000411220 A0A0A0MRY4 1105 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 PRNPP04156 253 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 FGFR3P22607 806 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 INHBCP55103 352 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 RAC1P63000 192 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 CTBSQ01459 385 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 NFIAQ12857 509 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 ATG4DQ86TL0 474 aaPredicted RBP1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 SCUBE1Q8IWY4 988 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 AGBL1Q96MI9 1066 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 HRH3Q9Y5N1 445 aa1.14□□□□□ -2.23
RNU4-88P-201ENST00000411220 PROB1E7EW31 1015 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 KRT1P04264 644 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 NID1P14543 1247 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 KCNA10Q16322 511 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 MLANAQ16655 118 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 SPATA3Q8NHX4 192 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms