RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 GNASQ5JWF2 1037 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 TMEM214Q6NUQ4 689 aaKnown RBP7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 DEPDC4Q8N2C3 294 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 GPR161Q8N6U8 529 aaKnown RBP7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 GMCL1Q96IK5 515 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 TIMMDC1Q9NPL8 285 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 CUEDC1Q9NWM3 386 aaPredicted RBP7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 TRIM50Q86XT4 487 aa7.32□□□□□ -1.24
RNU4-55P-201ENST00000410731 PPARGC1BQ86YN6 1023 aaKnown RBP7.32□□□□□ -1.24
RNU4-55P-201ENST00000410731 TRIM22Q8IYM9 498 aa7.32□□□□□ -1.24
RNU4-55P-201ENST00000410731 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
RNU4-55P-201ENST00000410731 RHBDD1Q8TEB9 315 aa7.32□□□□□ -1.24
RNU4-55P-201ENST00000410731 C4orf17Q53FE4 359 aa7.31□□□□□ -1.24
RNU4-55P-201ENST00000410731 ZNF837Q96EG3 531 aaPredicted RBP7.31□□□□□ -1.24
RNU4-55P-201ENST00000410731 SLC4A9Q96Q91 983 aa7.31□□□□□ -1.24
RNU4-55P-201ENST00000410731 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
RNU4-55P-201ENST00000410731 A0A1B0GTH6 734 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 SMTNP53814 917 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 KRT76Q01546 638 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 PSME1Q06323 249 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 MTFR1Q15390 333 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 GAS2L1Q99501 681 aaPredicted RBP7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
RNU4-55P-201ENST00000410731 H7C1W4 665 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 F11P03951 625 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 PHKA2P46019 1235 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 ZSCAN1Q8NBB4 408 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 MAFBQ9Y5Q3 323 aaPredicted RBP7.29□□□□□ -1.24
RNU4-55P-201ENST00000410731 A6NJY4 79 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 BACH1O14867 736 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 CLDN10P78369 228 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 DBN1Q16643 649 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 CNTNAP3BQ96NU0 1288 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 CNTNAP3Q9BZ76 1288 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
RNU4-55P-201ENST00000410731 PALM3A6NDB9 673 aaPredicted RBP7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 CDK2AP1O14519 115 aa7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 ZNF295-AS1Q8N0V1 137 aa7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 NIFKQ9BYG3 293 aaKnown RBP7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 PPP1R12CQ9BZL4 782 aa7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 TFIP11Q9UBB9 837 aaKnown RBP7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 MKRN1Q9UHC7 482 aaKnown RBP7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 KIAA1024Q9UPX6 916 aa7.27□□□□□ -1.25
RNU4-55P-201ENST00000410731 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 PLA2G4AP47712 749 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 GAS6Q14393 721 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 LBRQ14739 615 aaKnown RBP7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 FOXR1Q6PIV2 292 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 SIX5Q8N196 739 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 LARGE2Q8N3Y3 721 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 OGFOD1Q8N543 542 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 TPCN2Q8NHX9 752 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 NUCKS1Q9H1E3 243 aaKnown RBP7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 GPAMQ9HCL2 828 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 USP3Q9Y6I4 520 aa7.26□□□□□ -1.25
RNU4-55P-201ENST00000410731 MSX1P28360 303 aa7.25□□□□□ -1.25
RNU4-55P-201ENST00000410731 EPHA4P54764 986 aa7.25□□□□□ -1.25
RNU4-55P-201ENST00000410731 CCDC102BQ68D86 513 aa7.25□□□□□ -1.25
RNU4-55P-201ENST00000410731 C1orf216Q8TAB5 229 aa7.25□□□□□ -1.25
RNU4-55P-201ENST00000410731 SCHIP1Q9P0W5 487 aaPredicted RBP7.25□□□□□ -1.25
RNU4-55P-201ENST00000410731 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 THBS1P07996 1170 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 SLURP2P0DP57 97 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 FOXK2Q01167 660 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 GTPBP3Q969Y2 492 aaKnown RBP7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 CRISPLD1Q9H336 500 aa7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 ZNF777Q9ULD5 760 aaPredicted RBP7.24□□□□□ -1.25
RNU4-55P-201ENST00000410731 M0R2N6 131 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 GPR25O00155 361 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 CSB-PGBD3P0DP91 1061 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 ATP4AP20648 1035 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 NBPF1Q3BBV0 1214 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 PGBD3Q8N328 593 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 RUBCNLQ9H714 662 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 MBIPQ9NS73 344 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 GTF3C3Q9Y5Q9 886 aa7.23□□□□□ -1.25
RNU4-55P-201ENST00000410731 DKK1O94907 266 aa7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 RASA1P20936 1047 aa7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 SRSF11Q05519 484 aaKnown RBP7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 EFHC2Q5JST6 749 aa7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 ZNF594Q96JF6 807 aaPredicted RBP7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 ZDHHC3Q9NYG2 299 aa7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
RNU4-55P-201ENST00000410731 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
RNU4-55P-201ENST00000410731 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
RNU4-55P-201ENST00000410731 KANK4Q5T7N3 995 aaPredicted RBP7.21□□□□□ -1.26
RNU4-55P-201ENST00000410731 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.26
RNU4-55P-201ENST00000410731 TNS4Q8IZW8 715 aa7.21□□□□□ -1.26
RNU4-55P-201ENST00000410731 CFHR5Q9BXR6 569 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms