RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 KDM4AO75164 1064 aa6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 BRICD5Q6PL45 260 aa6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 DDX17Q92841 729 aaKnown RBP6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 C8orf37Q96NL8 207 aa6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 REPIN1Q9BWE0 567 aaKnown RBP6.99□□□□□ -1.29
RNU4-25P-201ENST00000410569 METP08581 1390 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 LOC105371045A0A1W2PR82 267 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 GFRA3O60609 400 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 SLC19A1P41440 591 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 USP46P62068 366 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 RBM6P78332 1123 aaKnown RBP6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 AMHR2Q16671 573 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 FAM160A2Q8N612 972 aaPredicted RBP6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 BRWD3Q6RI45 1802 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 ATRNO75882 1429 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 C1orf167Q5SNV9 1468 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 LRP5O75197 1615 aa6.98□□□□□ -1.29
RNU4-25P-201ENST00000410569 KIF1BO60333 1816 aa6.97□□□□□ -1.29
RNU4-25P-201ENST00000410569 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
RNU4-25P-201ENST00000410569 RNF19BQ6ZMZ0 732 aa6.97□□□□□ -1.29
RNU4-25P-201ENST00000410569 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
RNU4-25P-201ENST00000410569 MYOM2P54296 1465 aa6.97□□□□□ -1.29
RNU4-25P-201ENST00000410569 ABCA3Q99758 1704 aa6.96□□□□□ -1.29
RNU4-25P-201ENST00000410569 GLI3P10071 1580 aa6.96□□□□□ -1.29
RNU4-25P-201ENST00000410569 CDC42BPGQ6DT37 1551 aa6.96□□□□□ -1.29
RNU4-25P-201ENST00000410569 PTCH1Q13635 1447 aa6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRAG1Q86YV5 1406 aa6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 NRG2O14511 850 aaPredicted RBP6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 Q3C1V9 767 aa6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 MSS51Q4VC12 460 aa6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 SPRYD7Q5W111 196 aa6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.3
RNU4-25P-201ENST00000410569 PPLO60437 1756 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 HOXA2O43364 376 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 ADAMTS2O95450 1211 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 FAM50AQ14320 339 aaKnown RBP6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 Q6ZNB5 142 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 ZNF598Q86UK7 904 aaKnown RBP6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 LRRC59Q96AG4 307 aaKnown RBP6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 PXDNQ92626 1479 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 ROCK1Q13464 1354 aa6.95□□□□□ -1.3
RNU4-25P-201ENST00000410569 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 TRIM67Q6ZTA4 783 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 HLA-CQ95604 372 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRDM9Q9NQV7 894 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 PDZRN3Q9UPQ7 1066 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 SOS2Q07890 1332 aaPredicted RBP6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 USP32Q8NFA0 1604 aa6.94□□□□□ -1.3
RNU4-25P-201ENST00000410569 KNDC1Q76NI1 1749 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 BCL9LQ86UU0 1499 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 TTLL12Q14166 644 aaPredicted RBP6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 NGLY1Q96IV0 654 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 FCF1Q9Y324 198 aaKnown RBP6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 NUP155O75694 1391 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 ROBO2Q9HCK4 1378 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 FMN2Q9NZ56 1722 aa6.93□□□□□ -1.3
RNU4-25P-201ENST00000410569 LCE2BO14633 110 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 TRIM66O15016 1216 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 GIGYF2Q6Y7W6 1299 aaKnown RBP6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 NUTM1Q86Y26 1132 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 AK7Q96M32 723 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 USB1Q9BQ65 265 aaKnown RBP6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 USP21Q9UK80 565 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 TRPC5Q9UL62 973 aaPredicted RBP6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 KIF1AQ12756 1690 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 IFT172Q9UG01 1749 aa6.92□□□□□ -1.3
RNU4-25P-201ENST00000410569 NRAPQ86VF7 1730 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 NWD2Q9ULI1 1742 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 RPIAP49247 311 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 MMP16P51512 607 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRR20EP86478 221 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRR20CP86479 221 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRR20DP86480 221 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRR20BP86481 221 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 PRR20AP86496 221 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 GUCA2AQ02747 115 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 ORAI2Q96SN7 254 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 RALGAPBQ86X10 1494 aa6.91□□□□□ -1.3
RNU4-25P-201ENST00000410569 RGPD8O14715 1765 aaPredicted RBP6.9□□□□□ -1.3
RNU4-25P-201ENST00000410569 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
RNU4-25P-201ENST00000410569 PARP9Q8IXQ6 854 aa6.9□□□□□ -1.3
RNU4-25P-201ENST00000410569 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.3
RNU4-25P-201ENST00000410569 BLMP54132 1417 aaPredicted RBP6.9□□□□□ -1.31
RNU4-25P-201ENST00000410569 SLIT2O94813 1529 aa6.9□□□□□ -1.31
RNU4-25P-201ENST00000410569 GDF9O60383 454 aa6.89□□□□□ -1.31
RNU4-25P-201ENST00000410569 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
RNU4-25P-201ENST00000410569 HFM1A2PYH4 1435 aa6.89□□□□□ -1.31
RNU4-25P-201ENST00000410569 TNS1Q9HBL0 1735 aaKnown RBP6.89□□□□□ -1.31
RNU4-25P-201ENST00000410569 RGPD1P0DJD0 1748 aa6.88□□□□□ -1.31
RNU4-25P-201ENST00000410569 FDX1P10109 184 aa6.88□□□□□ -1.31
RNU4-25P-201ENST00000410569 TRAF7Q6Q0C0 670 aa6.88□□□□□ -1.31
RNU4-25P-201ENST00000410569 PCDHGC3Q9UN70 934 aa6.88□□□□□ -1.31
RNU4-25P-201ENST00000410569 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms