RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
VAMP8-202ENST00000409760 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
VAMP8-202ENST00000409760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
VAMP8-202ENST00000409760 SSFA2P28290 1259 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 MTHFSP49914 203 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 AK7Q96M32 723 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 CD2APQ9Y5K6 639 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 ZNF831Q5JPB2 1677 aa12.92□□□□□ -0.34
VAMP8-202ENST00000409760 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
VAMP8-202ENST00000409760 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
VAMP8-202ENST00000409760 PHF14O94880 888 aa12.9□□□□□ -0.34
VAMP8-202ENST00000409760 IL13P35225 146 aa12.9□□□□□ -0.34
VAMP8-202ENST00000409760 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
VAMP8-202ENST00000409760 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
VAMP8-202ENST00000409760 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
VAMP8-202ENST00000409760 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
VAMP8-202ENST00000409760 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
VAMP8-202ENST00000409760 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
VAMP8-202ENST00000409760 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 ERVV-2B6SEH9 535 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 GNPATO15228 680 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
VAMP8-202ENST00000409760 ATP6V1AP38606 617 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 ADCY9O60503 1353 aa12.88□□□□□ -0.35
VAMP8-202ENST00000409760 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
VAMP8-202ENST00000409760 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
VAMP8-202ENST00000409760 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
VAMP8-202ENST00000409760 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
VAMP8-202ENST00000409760 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
VAMP8-202ENST00000409760 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
VAMP8-202ENST00000409760 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
VAMP8-202ENST00000409760 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
VAMP8-202ENST00000409760 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
VAMP8-202ENST00000409760 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 RALBP1Q15311 655 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 C4AP0C0L4 1744 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 TJP1Q07157 1748 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 MRC1P22897 1456 aa12.84□□□□□ -0.35
VAMP8-202ENST00000409760 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.35
VAMP8-202ENST00000409760 MMP10P09238 476 aa12.83□□□□□ -0.36
VAMP8-202ENST00000409760 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
VAMP8-202ENST00000409760 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
VAMP8-202ENST00000409760 GYS1P13807 737 aa12.82□□□□□ -0.36
VAMP8-202ENST00000409760 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
VAMP8-202ENST00000409760 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
VAMP8-202ENST00000409760 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
VAMP8-202ENST00000409760 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
VAMP8-202ENST00000409760 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 ADRA2BP18089 450 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 CABP4P57796 275 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
VAMP8-202ENST00000409760 TRAPPC3LQ5T215 181 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
VAMP8-202ENST00000409760 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
VAMP8-202ENST00000409760 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
VAMP8-202ENST00000409760 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
VAMP8-202ENST00000409760 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
VAMP8-202ENST00000409760 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
VAMP8-202ENST00000409760 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
VAMP8-202ENST00000409760 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
VAMP8-202ENST00000409760 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
VAMP8-202ENST00000409760 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
VAMP8-202ENST00000409760 FCHSD2O94868 740 aa12.78□□□□□ -0.36
VAMP8-202ENST00000409760 HMOX1P09601 288 aa12.78□□□□□ -0.36
VAMP8-202ENST00000409760 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
VAMP8-202ENST00000409760 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
VAMP8-202ENST00000409760 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
VAMP8-202ENST00000409760 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
VAMP8-202ENST00000409760 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
VAMP8-202ENST00000409760 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
VAMP8-202ENST00000409760 NEFMP07197 916 aa12.77□□□□□ -0.37
VAMP8-202ENST00000409760 KCNA3P22001 575 aa12.77□□□□□ -0.37
VAMP8-202ENST00000409760 TGFB2P61812 414 aa12.77□□□□□ -0.37
VAMP8-202ENST00000409760 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
VAMP8-202ENST00000409760 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
VAMP8-202ENST00000409760 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
VAMP8-202ENST00000409760 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
VAMP8-202ENST00000409760 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
VAMP8-202ENST00000409760 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
VAMP8-202ENST00000409760 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
VAMP8-202ENST00000409760 DDR1Q08345 913 aa12.76□□□□□ -0.37
VAMP8-202ENST00000409760 DPEP1P16444 411 aa12.75□□□□□ -0.37
VAMP8-202ENST00000409760 RFC4P35249 363 aa12.75□□□□□ -0.37
VAMP8-202ENST00000409760 FKBP8Q14318 412 aa12.75□□□□□ -0.37
VAMP8-202ENST00000409760 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
VAMP8-202ENST00000409760 DNAJC10Q8IXB1 793 aa12.75□□□□□ -0.37
VAMP8-202ENST00000409760 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
VAMP8-202ENST00000409760 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
VAMP8-202ENST00000409760 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
VAMP8-202ENST00000409760 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
VAMP8-202ENST00000409760 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
VAMP8-202ENST00000409760 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms