RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ATP6V1AP38606 617 aa23.51■■□□□ 1.35
SCRN1-203ENST00000409570 PHKG2P15735 406 aa23.5■■□□□ 1.35
SCRN1-203ENST00000409570 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
SCRN1-203ENST00000409570 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
SCRN1-203ENST00000409570 BRCA1P38398 1863 aaKnown RBP23.49■■□□□ 1.35
SCRN1-203ENST00000409570 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
SCRN1-203ENST00000409570 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
SCRN1-203ENST00000409570 COL5A3P25940 1745 aaPredicted RBP23.49■■□□□ 1.35
SCRN1-203ENST00000409570 MMP10P09238 476 aa23.48■■□□□ 1.35
SCRN1-203ENST00000409570 MYH14Q7Z406 1995 aaKnown RBP23.47■■□□□ 1.35
SCRN1-203ENST00000409570 KDRP35968 1356 aa23.47■■□□□ 1.35
SCRN1-203ENST00000409570 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
SCRN1-203ENST00000409570 SLC4A9Q96Q91 983 aa23.44■■□□□ 1.34
SCRN1-203ENST00000409570 C4AP0C0L4 1744 aa23.44■■□□□ 1.34
SCRN1-203ENST00000409570 C10orf71Q711Q0 1435 aa23.43■■□□□ 1.34
SCRN1-203ENST00000409570 RTCBQ9Y3I0 505 aaKnown RBP23.43■■□□□ 1.34
SCRN1-203ENST00000409570 ARFGEF1Q9Y6D6 1849 aa23.43■■□□□ 1.34
SCRN1-203ENST00000409570 TGFB2P61812 414 aa23.42■■□□□ 1.34
SCRN1-203ENST00000409570 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
SCRN1-203ENST00000409570 TRAPPC3LQ5T215 181 aa23.42■■□□□ 1.34
SCRN1-203ENST00000409570 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
SCRN1-203ENST00000409570 A0A0G2JLW4 131 aa23.41■■□□□ 1.34
SCRN1-203ENST00000409570 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
SCRN1-203ENST00000409570 BCS1LQ9Y276 419 aa23.41■■□□□ 1.34
SCRN1-203ENST00000409570 RC3H1Q5TC82 1133 aaKnown RBP23.39■■□□□ 1.33
SCRN1-203ENST00000409570 ARHGEF1Q92888 912 aaKnown RBP23.39■■□□□ 1.33
SCRN1-203ENST00000409570 ERVV-2B6SEH9 535 aa23.38■■□□□ 1.33
SCRN1-203ENST00000409570 ADRA2BP18089 450 aa23.38■■□□□ 1.33
SCRN1-203ENST00000409570 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
SCRN1-203ENST00000409570 CNTNAP4Q9C0A0 1308 aa23.37■■□□□ 1.33
SCRN1-203ENST00000409570 GYS1P13807 737 aa23.37■■□□□ 1.33
SCRN1-203ENST00000409570 DPEP1P16444 411 aa23.37■■□□□ 1.33
SCRN1-203ENST00000409570 RPS6KA4O75676 772 aa23.36■■□□□ 1.33
SCRN1-203ENST00000409570 TOMM70O94826 608 aa23.36■■□□□ 1.33
SCRN1-203ENST00000409570 APLP1P51693 650 aa23.36■■□□□ 1.33
SCRN1-203ENST00000409570 ARHGAP27Q6ZUM4 889 aa23.36■■□□□ 1.33
SCRN1-203ENST00000409570 CCDC87Q9NVE4 849 aa23.36■■□□□ 1.33
SCRN1-203ENST00000409570 KDM6AO15550 1401 aaPredicted RBP23.35■■□□□ 1.33
SCRN1-203ENST00000409570 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
SCRN1-203ENST00000409570 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
SCRN1-203ENST00000409570 HSP90AB1P08238 724 aaKnown RBP23.34■■□□□ 1.33
SCRN1-203ENST00000409570 RFC4P35249 363 aa23.34■■□□□ 1.33
SCRN1-203ENST00000409570 NMRK2Q9NPI5 230 aa23.34■■□□□ 1.33
SCRN1-203ENST00000409570 WDR90Q96KV7 1748 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 SBF1O95248 1867 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 FCHSD2O94868 740 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 KCNA3P22001 575 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 DNAJC5GQ8N7S2 189 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 PARP3Q9Y6F1 533 aa23.33■■□□□ 1.33
SCRN1-203ENST00000409570 TJP1Q07157 1748 aa23.32■■□□□ 1.32
SCRN1-203ENST00000409570 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
SCRN1-203ENST00000409570 CABP4P57796 275 aa23.3■■□□□ 1.32
SCRN1-203ENST00000409570 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
SCRN1-203ENST00000409570 SCN11AQ9UI33 1791 aa23.29■■□□□ 1.32
SCRN1-203ENST00000409570 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
SCRN1-203ENST00000409570 C9orf131Q5VYM1 1079 aa23.28■■□□□ 1.32
SCRN1-203ENST00000409570 POLR3GLQ9BT43 218 aa23.28■■□□□ 1.32
SCRN1-203ENST00000409570 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
SCRN1-203ENST00000409570 CRKLP46109 303 aaKnown RBP23.27■■□□□ 1.32
SCRN1-203ENST00000409570 AMOTQ4VCS5 1084 aa23.27■■□□□ 1.32
SCRN1-203ENST00000409570 SRP68Q9UHB9 627 aaKnown RBP23.27■■□□□ 1.32
SCRN1-203ENST00000409570 PTCD1O75127 700 aaKnown RBP23.26■■□□□ 1.31
SCRN1-203ENST00000409570 RBM46Q8TBY0 533 aaKnown RBP23.26■■□□□ 1.31
SCRN1-203ENST00000409570 PIM2Q9P1W9 311 aa23.26■■□□□ 1.31
SCRN1-203ENST00000409570 MTHFSP49914 203 aa23.25■■□□□ 1.31
SCRN1-203ENST00000409570 DDR1Q08345 913 aa23.25■■□□□ 1.31
SCRN1-203ENST00000409570 FKBP8Q14318 412 aa23.25■■□□□ 1.31
SCRN1-203ENST00000409570 AEBP1Q8IUX7 1158 aa23.25■■□□□ 1.31
SCRN1-203ENST00000409570 USP42Q9H9J4 1324 aaKnown RBP23.25■■□□□ 1.31
SCRN1-203ENST00000409570 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
SCRN1-203ENST00000409570 NFATC2IPQ8NCF5 419 aa23.24■■□□□ 1.31
SCRN1-203ENST00000409570 KCPQ6ZWJ8 1503 aa23.23■■□□□ 1.31
SCRN1-203ENST00000409570 TNRC6CQ9HCJ0 1690 aaKnown RBP23.23■■□□□ 1.31
SCRN1-203ENST00000409570 DALRD3Q5D0E6 543 aaKnown RBP23.22■■□□□ 1.31
SCRN1-203ENST00000409570 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
SCRN1-203ENST00000409570 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
SCRN1-203ENST00000409570 PANK3Q9H999 370 aa23.21■■□□□ 1.31
SCRN1-203ENST00000409570 CCDC88AQ3V6T2 1871 aa23.21■■□□□ 1.31
SCRN1-203ENST00000409570 CHRNA5P30532 468 aa23.2■■□□□ 1.3
SCRN1-203ENST00000409570 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
SCRN1-203ENST00000409570 C16orf71Q8IYS4 520 aaPredicted RBP23.2■■□□□ 1.3
SCRN1-203ENST00000409570 RNF181Q9P0P0 153 aa23.2■■□□□ 1.3
SCRN1-203ENST00000409570 TM4SF1P30408 202 aa23.19■■□□□ 1.3
SCRN1-203ENST00000409570 HTRA3P83110 453 aa23.19■■□□□ 1.3
SCRN1-203ENST00000409570 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
SCRN1-203ENST00000409570 POLRMTO00411 1230 aaKnown RBP23.18■■□□□ 1.3
SCRN1-203ENST00000409570 FSTL1Q12841 308 aa23.18■■□□□ 1.3
SCRN1-203ENST00000409570 DLEC1Q9Y238 1755 aa23.18■■□□□ 1.3
SCRN1-203ENST00000409570 NRXN2Q9P2S2 1712 aa23.18■■□□□ 1.3
SCRN1-203ENST00000409570 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
SCRN1-203ENST00000409570 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
SCRN1-203ENST00000409570 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
SCRN1-203ENST00000409570 PCNTO95613 3336 aa23.15■■□□□ 1.3
SCRN1-203ENST00000409570 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
SCRN1-203ENST00000409570 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
SCRN1-203ENST00000409570 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.29
SCRN1-203ENST00000409570 MORC1Q86VD1 984 aa23.14■■□□□ 1.29
SCRN1-203ENST00000409570 JMYQ8N9B5 988 aa23.14■■□□□ 1.29
SCRN1-203ENST00000409570 SOS1Q07889 1333 aaPredicted RBP23.13■■□□□ 1.29
SCRN1-203ENST00000409570 IL13P35225 146 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms