RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 MPRIPQ6WCQ1 1025 aa24.28■■□□□ 1.48
LIMS2-204ENST00000409286 COL18A1P39060 1754 aa24.28■■□□□ 1.48
LIMS2-204ENST00000409286 CACNA1FO60840 1977 aa24.27■■□□□ 1.48
LIMS2-204ENST00000409286 BTBD11A6QL63 1104 aa24.27■■□□□ 1.48
LIMS2-204ENST00000409286 NLRP2Q9NX02 1062 aa24.27■■□□□ 1.48
LIMS2-204ENST00000409286 SLAIN2Q9P270 581 aa24.27■■□□□ 1.48
LIMS2-204ENST00000409286 ZNF335Q9H4Z2 1342 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-204ENST00000409286 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 ANKRD45Q5TZF3 282 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 RAPGEF4Q8WZA2 1011 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 DCTPP1Q9H773 170 aa24.26■■□□□ 1.47
LIMS2-204ENST00000409286 FAM208AQ9UK61 1670 aaKnown RBP24.25■■□□□ 1.47
LIMS2-204ENST00000409286 LNPKQ9C0E8 428 aa24.25■■□□□ 1.47
LIMS2-204ENST00000409286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.47
LIMS2-204ENST00000409286 KDM3BQ7LBC6 1761 aa24.25■■□□□ 1.47
LIMS2-204ENST00000409286 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-204ENST00000409286 SOS2Q07890 1332 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-204ENST00000409286 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
LIMS2-204ENST00000409286 CEP85Q6P2H3 762 aa24.24■■□□□ 1.47
LIMS2-204ENST00000409286 MEIS3Q99687 375 aa24.24■■□□□ 1.47
LIMS2-204ENST00000409286 ATP10DQ9P241 1426 aa24.23■■□□□ 1.47
LIMS2-204ENST00000409286 F6X3S4 739 aa24.23■■□□□ 1.47
LIMS2-204ENST00000409286 SLC4A10Q6U841 1118 aa24.23■■□□□ 1.47
LIMS2-204ENST00000409286 CRYBG1Q9Y4K1 1723 aa24.23■■□□□ 1.47
LIMS2-204ENST00000409286 SEC24BO95487 1268 aa24.22■■□□□ 1.47
LIMS2-204ENST00000409286 NECTIN2Q92692 538 aa24.22■■□□□ 1.47
LIMS2-204ENST00000409286 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
LIMS2-204ENST00000409286 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
LIMS2-204ENST00000409286 UPF2Q9HAU5 1272 aaKnown RBP24.21■■□□□ 1.47
LIMS2-204ENST00000409286 ADAMTS7Q9UKP4 1686 aa24.2■■□□□ 1.46
LIMS2-204ENST00000409286 PXDNLA1KZ92 1463 aa24.2■■□□□ 1.46
LIMS2-204ENST00000409286 KCNQ3O43525 872 aa24.2■■□□□ 1.46
LIMS2-204ENST00000409286 GNAI3P08754 354 aa24.19■■□□□ 1.46
LIMS2-204ENST00000409286 CHRNA2Q15822 529 aa24.19■■□□□ 1.46
LIMS2-204ENST00000409286 HMMRO75330 724 aa24.18■■□□□ 1.46
LIMS2-204ENST00000409286 HEG1Q9ULI3 1381 aa24.18■■□□□ 1.46
LIMS2-204ENST00000409286 GNAI2P04899 355 aa24.18■■□□□ 1.46
LIMS2-204ENST00000409286 EIF2S2P20042 333 aaKnown RBP24.17■■□□□ 1.46
LIMS2-204ENST00000409286 BMP2KLQ5H9B9 411 aa24.17■■□□□ 1.46
LIMS2-204ENST00000409286 PHKG2P15735 406 aa24.16■■□□□ 1.46
LIMS2-204ENST00000409286 IFNL2Q8IZJ0 200 aa24.15■■□□□ 1.46
LIMS2-204ENST00000409286 GIGYF1O75420 1035 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-204ENST00000409286 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
LIMS2-204ENST00000409286 MEGF6O75095 1541 aa24.14■■□□□ 1.45
LIMS2-204ENST00000409286 TBC1D32Q96NH3 1257 aa24.13■■□□□ 1.45
LIMS2-204ENST00000409286 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
LIMS2-204ENST00000409286 CHPF2Q9P2E5 772 aa24.13■■□□□ 1.45
LIMS2-204ENST00000409286 DBF4Q9UBU7 674 aaPredicted RBP24.13■■□□□ 1.45
LIMS2-204ENST00000409286 SIPA1L3O60292 1781 aaPredicted RBP24.13■■□□□ 1.45
LIMS2-204ENST00000409286 DAXXQ9UER7 740 aaPredicted RBP24.12■■□□□ 1.45
LIMS2-204ENST00000409286 N4BP2Q86UW6 1770 aaPredicted RBP24.12■■□□□ 1.45
LIMS2-204ENST00000409286 HSP90AB1P08238 724 aaKnown RBP24.11■■□□□ 1.45
LIMS2-204ENST00000409286 PRDM11Q9NQV5 511 aa24.11■■□□□ 1.45
LIMS2-204ENST00000409286 DCAF5Q96JK2 942 aa24.1■■□□□ 1.45
LIMS2-204ENST00000409286 NHSL1Q5SYE7 1610 aa24.1■■□□□ 1.45
LIMS2-204ENST00000409286 KDM6AO15550 1401 aaPredicted RBP24.1■■□□□ 1.45
LIMS2-204ENST00000409286 ATP8B2P98198 1209 aa24.09■■□□□ 1.45
LIMS2-204ENST00000409286 SRCIN1Q9C0H9 1055 aa24.09■■□□□ 1.45
LIMS2-204ENST00000409286 WDR17Q8IZU2 1322 aa24.09■■□□□ 1.45
LIMS2-204ENST00000409286 PLEKHM2Q8IWE5 1019 aa24.08■■□□□ 1.45
LIMS2-204ENST00000409286 USP44Q9H0E7 712 aa24.08■■□□□ 1.45
LIMS2-204ENST00000409286 ZNF790Q6PG37 636 aa24.08■■□□□ 1.44
LIMS2-204ENST00000409286 DNAAF4Q8WXU2 420 aa24.08■■□□□ 1.44
LIMS2-204ENST00000409286 SCN11AQ9UI33 1791 aa24.07■■□□□ 1.44
LIMS2-204ENST00000409286 PKD1L3Q7Z443 1732 aa24.06■■□□□ 1.44
LIMS2-204ENST00000409286 CYP27B1O15528 508 aa24.06■■□□□ 1.44
LIMS2-204ENST00000409286 MYT1Q01538 1121 aa24.06■■□□□ 1.44
LIMS2-204ENST00000409286 HYPKQ9NX55 129 aa24.06■■□□□ 1.44
LIMS2-204ENST00000409286 UBTFL1P0CB47 393 aaPredicted RBP24.05■■□□□ 1.44
LIMS2-204ENST00000409286 BEND3Q5T5X7 828 aa24.05■■□□□ 1.44
LIMS2-204ENST00000409286 PI4KAP2A4QPH2 592 aa24.05■■□□□ 1.44
LIMS2-204ENST00000409286 PI4KAP1Q8N8J0 262 aa24.05■■□□□ 1.44
LIMS2-204ENST00000409286 NFATC2IPQ8NCF5 419 aa24.05■■□□□ 1.44
LIMS2-204ENST00000409286 MRC1P22897 1456 aa24.04■■□□□ 1.44
LIMS2-204ENST00000409286 EIF5BO60841 1220 aaKnown RBP24.03■■□□□ 1.44
LIMS2-204ENST00000409286 BECN1Q14457 450 aa24.03■■□□□ 1.44
LIMS2-204ENST00000409286 TOM1L2Q6ZVM7 507 aa24.03■■□□□ 1.44
LIMS2-204ENST00000409286 C22orf23Q9BZE7 217 aa24.03■■□□□ 1.44
LIMS2-204ENST00000409286 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
LIMS2-204ENST00000409286 LRRFIP2Q9Y608 721 aaKnown RBP24.03■■□□□ 1.44
LIMS2-204ENST00000409286 ABCA3Q99758 1704 aa24.02■■□□□ 1.44
LIMS2-204ENST00000409286 MFAP1P55081 439 aaKnown RBP24.02■■□□□ 1.44
LIMS2-204ENST00000409286 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
LIMS2-204ENST00000409286 COL5A2P05997 1499 aaPredicted RBP24.02■■□□□ 1.44
LIMS2-204ENST00000409286 ADCY9O60503 1353 aa24.02■■□□□ 1.44
LIMS2-204ENST00000409286 KSR2Q6VAB6 950 aa24.02■■□□□ 1.44
LIMS2-204ENST00000409286 ANXA1P04083 346 aa24.01■■□□□ 1.43
LIMS2-204ENST00000409286 TTC22Q5TAA0 569 aa24.01■■□□□ 1.43
LIMS2-204ENST00000409286 C16orf71Q8IYS4 520 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-204ENST00000409286 ALDH1L1O75891 902 aa24■■□□□ 1.43
LIMS2-204ENST00000409286 SLC39A6Q13433 755 aa24■■□□□ 1.43
LIMS2-204ENST00000409286 ZCRB1Q8TBF4 217 aaKnown RBP24■■□□□ 1.43
LIMS2-204ENST00000409286 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
LIMS2-204ENST00000409286 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-204ENST00000409286 SLC4A3P48751 1232 aa23.99■■□□□ 1.43
LIMS2-204ENST00000409286 PROSER3Q2NL68 480 aa23.99■■□□□ 1.43
LIMS2-204ENST00000409286 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
LIMS2-204ENST00000409286 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms