RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
APOBEC3B-204ENST00000407298 TOGARAM1Q9Y4F4 1720 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 KIF3CO14782 793 aa16.99■□□□□ 0.31
APOBEC3B-204ENST00000407298 PHKG2P15735 406 aa16.99■□□□□ 0.31
APOBEC3B-204ENST00000407298 APLP1P51693 650 aa16.99■□□□□ 0.31
APOBEC3B-204ENST00000407298 ITPK1Q13572 414 aa16.99■□□□□ 0.31
APOBEC3B-204ENST00000407298 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
APOBEC3B-204ENST00000407298 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
APOBEC3B-204ENST00000407298 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
APOBEC3B-204ENST00000407298 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
APOBEC3B-204ENST00000407298 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
APOBEC3B-204ENST00000407298 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
APOBEC3B-204ENST00000407298 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
APOBEC3B-204ENST00000407298 TOMM70O94826 608 aa16.96■□□□□ 0.31
APOBEC3B-204ENST00000407298 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
APOBEC3B-204ENST00000407298 RFC4P35249 363 aa16.95■□□□□ 0.3
APOBEC3B-204ENST00000407298 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
APOBEC3B-204ENST00000407298 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
APOBEC3B-204ENST00000407298 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
APOBEC3B-204ENST00000407298 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
APOBEC3B-204ENST00000407298 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
APOBEC3B-204ENST00000407298 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
APOBEC3B-204ENST00000407298 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
APOBEC3B-204ENST00000407298 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
APOBEC3B-204ENST00000407298 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
APOBEC3B-204ENST00000407298 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
APOBEC3B-204ENST00000407298 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
APOBEC3B-204ENST00000407298 FCHSD2O94868 740 aa16.92■□□□□ 0.3
APOBEC3B-204ENST00000407298 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
APOBEC3B-204ENST00000407298 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
APOBEC3B-204ENST00000407298 CNTNAP4Q9C0A0 1308 aa16.92■□□□□ 0.3
APOBEC3B-204ENST00000407298 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
APOBEC3B-204ENST00000407298 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
APOBEC3B-204ENST00000407298 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
APOBEC3B-204ENST00000407298 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
APOBEC3B-204ENST00000407298 KDRP35968 1356 aa16.9■□□□□ 0.3
APOBEC3B-204ENST00000407298 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
APOBEC3B-204ENST00000407298 GYS1P13807 737 aa16.9■□□□□ 0.3
APOBEC3B-204ENST00000407298 DPEP1P16444 411 aa16.9■□□□□ 0.3
APOBEC3B-204ENST00000407298 CABP4P57796 275 aa16.9■□□□□ 0.3
APOBEC3B-204ENST00000407298 ZNF831Q5JPB2 1677 aa16.89■□□□□ 0.29
APOBEC3B-204ENST00000407298 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
APOBEC3B-204ENST00000407298 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
APOBEC3B-204ENST00000407298 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
APOBEC3B-204ENST00000407298 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
APOBEC3B-204ENST00000407298 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
APOBEC3B-204ENST00000407298 MTHFSP49914 203 aa16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 C9orf131Q5VYM1 1079 aa16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 DNAJC5GQ8N7S2 189 aa16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3B-204ENST00000407298 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
APOBEC3B-204ENST00000407298 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
APOBEC3B-204ENST00000407298 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
APOBEC3B-204ENST00000407298 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
APOBEC3B-204ENST00000407298 FSTL1Q12841 308 aa16.85■□□□□ 0.29
APOBEC3B-204ENST00000407298 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
APOBEC3B-204ENST00000407298 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
APOBEC3B-204ENST00000407298 KCNA3P22001 575 aa16.84■□□□□ 0.29
APOBEC3B-204ENST00000407298 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
APOBEC3B-204ENST00000407298 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
APOBEC3B-204ENST00000407298 KIAA1551Q9HCM1 1747 aa16.83■□□□□ 0.28
APOBEC3B-204ENST00000407298 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
APOBEC3B-204ENST00000407298 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
APOBEC3B-204ENST00000407298 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
APOBEC3B-204ENST00000407298 ZPR1O75312 459 aa16.81■□□□□ 0.28
APOBEC3B-204ENST00000407298 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
APOBEC3B-204ENST00000407298 FKBP8Q14318 412 aa16.81■□□□□ 0.28
APOBEC3B-204ENST00000407298 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
APOBEC3B-204ENST00000407298 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
APOBEC3B-204ENST00000407298 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
APOBEC3B-204ENST00000407298 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
APOBEC3B-204ENST00000407298 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
APOBEC3B-204ENST00000407298 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
APOBEC3B-204ENST00000407298 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
APOBEC3B-204ENST00000407298 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
APOBEC3B-204ENST00000407298 ZC3H4Q9UPT8 1303 aaKnown RBP16.78■□□□□ 0.28
APOBEC3B-204ENST00000407298 PANK3Q9H999 370 aa16.78■□□□□ 0.28
APOBEC3B-204ENST00000407298 TM4SF1P30408 202 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 DDR1Q08345 913 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 RRAGCQ9HB90 399 aa16.77■□□□□ 0.28
APOBEC3B-204ENST00000407298 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
APOBEC3B-204ENST00000407298 CHRNA5P30532 468 aa16.76■□□□□ 0.27
APOBEC3B-204ENST00000407298 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
APOBEC3B-204ENST00000407298 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
APOBEC3B-204ENST00000407298 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
APOBEC3B-204ENST00000407298 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
APOBEC3B-204ENST00000407298 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
APOBEC3B-204ENST00000407298 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
APOBEC3B-204ENST00000407298 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
APOBEC3B-204ENST00000407298 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
APOBEC3B-204ENST00000407298 LMNB1P20700 586 aa16.73■□□□□ 0.27
APOBEC3B-204ENST00000407298 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
APOBEC3B-204ENST00000407298 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
APOBEC3B-204ENST00000407298 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms