RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 TMPRSS4Q9NRS4 437 aa6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 ZNF358Q9NW07 568 aa6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 TOR4AQ9NXH8 423 aa6.93□□□□□ -1.3
C1GALT1-202ENST00000402468 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
C1GALT1-202ENST00000402468 PHLDB3Q6NSJ2 640 aa6.92□□□□□ -1.3
C1GALT1-202ENST00000402468 TSEN2Q8NCE0 465 aaKnown RBP6.92□□□□□ -1.3
C1GALT1-202ENST00000402468 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 AXIN1O15169 862 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 NNTQ13423 1086 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 SNIP1Q8TAD8 396 aaKnown RBP6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 VTI1AQ96AJ9 217 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 PRIMPOLQ96LW4 560 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
C1GALT1-202ENST00000402468 TTC24A2A3L6 582 aaPredicted RBP6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 TMEM229AB2RXF0 380 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 FOXO3O43524 673 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 INHAP05111 366 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 IGFBP4P22692 258 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 NFX1Q12986 1120 aaKnown RBP6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 OCLNQ16625 522 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 NPM2Q86SE8 214 aaKnown RBP6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 SLAIN2Q9P270 581 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 STK17AQ9UEE5 414 aa6.9□□□□□ -1.3
C1GALT1-202ENST00000402468 LILRA1O75019 489 aa6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 WEE1P30291 646 aa6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 TAS1R3Q7RTX0 852 aa6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 SERTAD1Q9UHV2 236 aa6.89□□□□□ -1.31
C1GALT1-202ENST00000402468 WIPF1O43516 503 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 ABL1P00519 1130 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 ADH1AP07327 375 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 NR3C2P08235 984 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 SCNN1DP51172 638 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 ETNK1Q9HBU6 452 aa6.88□□□□□ -1.31
C1GALT1-202ENST00000402468 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 SERPINB4P48594 390 aa6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 INSM1Q01101 510 aaPredicted RBP6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 SCG3Q8WXD2 468 aaKnown RBP6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 COL26A1Q96A83 441 aa6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 SLC4A9Q96Q91 983 aa6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 BIN2Q9UBW5 565 aaPredicted RBP6.87□□□□□ -1.31
C1GALT1-202ENST00000402468 ATAD2Q6PL18 1390 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 A6NJY4 79 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 TLR1Q15399 786 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 TNS4Q8IZW8 715 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 ARHGEF10LQ9HCE6 1279 aa6.86□□□□□ -1.31
C1GALT1-202ENST00000402468 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 LGR5O75473 907 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 ERCC3P19447 782 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 ADD1P35611 737 aaKnown RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 SMTNP53814 917 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 SF3B2Q13435 895 aaKnown RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 FKBP5Q13451 457 aaPredicted RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 CHMP7Q8WUX9 453 aaPredicted RBP6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 CNKSR1Q969H4 720 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 ESYT1Q9BSJ8 1104 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 RAB6BQ9NRW1 208 aa6.85□□□□□ -1.31
C1GALT1-202ENST00000402468 H3BRB1 525 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 EPHA4P54764 986 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 CLN3Q13286 438 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 STAG2Q8N3U4 1231 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 TSPAN10Q9H1Z9 355 aaPredicted RBP6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 TUT1Q9H6E5 874 aaKnown RBP6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 SCHIP1Q9P0W5 487 aaPredicted RBP6.84□□□□□ -1.31
C1GALT1-202ENST00000402468 A0A1W2PRU2 124 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 STAU1O95793 577 aaKnown RBP6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 PTGIRP43119 386 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 MTFR1Q15390 333 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 Q6ZVU0 165 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 ITPKCQ96DU7 683 aa6.83□□□□□ -1.32
C1GALT1-202ENST00000402468 MEN1O00255 615 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 C21orf2O43822 256 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 ICMTO60725 284 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 UPP2O95045 317 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 IL2RAP01589 272 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 SNRPBP14678 240 aaKnown RBP6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 CBLBQ13191 982 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 ATP13A2Q9NQ11 1180 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 AMOTL2Q9Y2J4 779 aa6.82□□□□□ -1.32
C1GALT1-202ENST00000402468 J3QL48 77 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms