RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 AK7Q96M32 723 aa32.53■■■□□ 2.8
RSPO4-202ENST00000400634 UBR3Q6ZT12 1888 aa32.52■■■□□ 2.8
RSPO4-202ENST00000400634 ARXQ96QS3 562 aa32.52■■■□□ 2.8
RSPO4-202ENST00000400634 DCAF8L1A6NGE4 600 aa32.51■■■□□ 2.79
RSPO4-202ENST00000400634 MSH5O43196 834 aa32.51■■■□□ 2.79
RSPO4-202ENST00000400634 ATP6V1AP38606 617 aa32.51■■■□□ 2.79
RSPO4-202ENST00000400634 COL23A1Q86Y22 540 aaPredicted RBP32.51■■■□□ 2.79
RSPO4-202ENST00000400634 U2SURPO15042 1029 aaKnown RBP32.49■■■□□ 2.79
RSPO4-202ENST00000400634 FHDC1Q9C0D6 1143 aaPredicted RBP32.47■■■□□ 2.79
RSPO4-202ENST00000400634 PPP2R1AP30153 589 aa32.46■■■□□ 2.79
RSPO4-202ENST00000400634 LINC00116Q8NCU8 138 aa32.46■■■□□ 2.79
RSPO4-202ENST00000400634 NFATC2IPQ8NCF5 419 aa32.45■■■□□ 2.79
RSPO4-202ENST00000400634 SYT17Q9BSW7 474 aa32.45■■■□□ 2.79
RSPO4-202ENST00000400634 MAP3K5Q99683 1374 aa32.45■■■□□ 2.78
RSPO4-202ENST00000400634 ITPK1Q13572 414 aa32.44■■■□□ 2.78
RSPO4-202ENST00000400634 RBM42Q9BTD8 480 aaKnown RBP32.44■■■□□ 2.78
RSPO4-202ENST00000400634 NUDCQ9Y266 331 aa32.44■■■□□ 2.78
RSPO4-202ENST00000400634 SSFA2P28290 1259 aa32.43■■■□□ 2.78
RSPO4-202ENST00000400634 MTHFSDQ2M296 383 aaKnown RBP32.43■■■□□ 2.78
RSPO4-202ENST00000400634 COL5A3P25940 1745 aaPredicted RBP32.42■■■□□ 2.78
RSPO4-202ENST00000400634 ADAMTS7Q9UKP4 1686 aa32.41■■■□□ 2.78
RSPO4-202ENST00000400634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.4■■■□□ 2.78
RSPO4-202ENST00000400634 SLC52A2Q9HAB3 445 aa32.4■■■□□ 2.78
RSPO4-202ENST00000400634 MRC1P22897 1456 aa32.4■■■□□ 2.78
RSPO4-202ENST00000400634 RNMTO43148 476 aaKnown RBP32.39■■■□□ 2.78
RSPO4-202ENST00000400634 GAS2L2Q8NHY3 880 aa32.39■■■□□ 2.78
RSPO4-202ENST00000400634 GNPATO15228 680 aa32.38■■■□□ 2.77
RSPO4-202ENST00000400634 PHF14O94880 888 aa32.38■■■□□ 2.77
RSPO4-202ENST00000400634 LGR6Q9HBX8 967 aa32.38■■■□□ 2.77
RSPO4-202ENST00000400634 SLC4A9Q96Q91 983 aa32.37■■■□□ 2.77
RSPO4-202ENST00000400634 RC3H1Q5TC82 1133 aaKnown RBP32.36■■■□□ 2.77
RSPO4-202ENST00000400634 CICQ96RK0 1608 aaPredicted RBP32.36■■■□□ 2.77
RSPO4-202ENST00000400634 AMIGO3Q86WK7 504 aa32.35■■■□□ 2.77
RSPO4-202ENST00000400634 CNTNAP4Q9C0A0 1308 aa32.34■■■□□ 2.77
RSPO4-202ENST00000400634 PTCD1O75127 700 aaKnown RBP32.34■■■□□ 2.77
RSPO4-202ENST00000400634 MSL1Q68DK7 614 aa32.34■■■□□ 2.77
RSPO4-202ENST00000400634 RTCBQ9Y3I0 505 aaKnown RBP32.33■■■□□ 2.77
RSPO4-202ENST00000400634 MYH14Q7Z406 1995 aaKnown RBP32.32■■■□□ 2.77
RSPO4-202ENST00000400634 KLHL34Q8N239 644 aa32.32■■■□□ 2.76
RSPO4-202ENST00000400634 RSPH6AQ9H0K4 717 aa32.32■■■□□ 2.76
RSPO4-202ENST00000400634 GNAT3A8MTJ3 354 aa32.31■■■□□ 2.76
RSPO4-202ENST00000400634 U2AF1L5P0DN76 240 aaPredicted RBP32.31■■■□□ 2.76
RSPO4-202ENST00000400634 PRKAR2BP31323 418 aa32.31■■■□□ 2.76
RSPO4-202ENST00000400634 U2AF1Q01081 240 aaKnown RBP eCLIP32.31■■■□□ 2.76
RSPO4-202ENST00000400634 TJP1Q07157 1748 aa32.3■■■□□ 2.76
RSPO4-202ENST00000400634 ADRA2BP18089 450 aa32.29■■■□□ 2.76
RSPO4-202ENST00000400634 TRAPPC3LQ5T215 181 aa32.29■■■□□ 2.76
RSPO4-202ENST00000400634 FCHSD2O94868 740 aa32.28■■■□□ 2.76
RSPO4-202ENST00000400634 UTRNP46939 3433 aa32.28■■■□□ 2.76
RSPO4-202ENST00000400634 SMIM5Q71RC9 77 aa32.27■■■□□ 2.76
RSPO4-202ENST00000400634 RPS6KA4O75676 772 aa32.26■■■□□ 2.75
RSPO4-202ENST00000400634 SIPA1L3O60292 1781 aaPredicted RBP32.24■■■□□ 2.75
RSPO4-202ENST00000400634 UBR2Q8IWV8 1755 aa32.24■■■□□ 2.75
RSPO4-202ENST00000400634 TEFQ10587 303 aa32.24■■■□□ 2.75
RSPO4-202ENST00000400634 PHACTR3Q96KR7 559 aa32.24■■■□□ 2.75
RSPO4-202ENST00000400634 SLC39A6Q13433 755 aa32.23■■■□□ 2.75
RSPO4-202ENST00000400634 RALBP1Q15311 655 aa32.23■■■□□ 2.75
RSPO4-202ENST00000400634 KCPQ6ZWJ8 1503 aa32.22■■■□□ 2.75
RSPO4-202ENST00000400634 CRKLP46109 303 aaKnown RBP32.22■■■□□ 2.75
RSPO4-202ENST00000400634 IL17REQ8NFR9 667 aa32.22■■■□□ 2.75
RSPO4-202ENST00000400634 CHD4Q14839 1912 aa32.22■■■□□ 2.75
RSPO4-202ENST00000400634 C4AP0C0L4 1744 aa32.21■■■□□ 2.75
RSPO4-202ENST00000400634 DDX10Q13206 875 aaKnown RBP32.21■■■□□ 2.75
RSPO4-202ENST00000400634 TTC5Q8N0Z6 440 aa32.21■■■□□ 2.75
RSPO4-202ENST00000400634 CD2APQ9Y5K6 639 aa32.21■■■□□ 2.75
RSPO4-202ENST00000400634 RFC4P35249 363 aa32.2■■■□□ 2.75
RSPO4-202ENST00000400634 VSIG10Q8N0Z9 540 aa32.2■■■□□ 2.75
RSPO4-202ENST00000400634 ARHGEF1Q92888 912 aaKnown RBP32.19■■■□□ 2.74
RSPO4-202ENST00000400634 CEMIPQ8WUJ3 1361 aa32.19■■■□□ 2.74
RSPO4-202ENST00000400634 NEFMP07197 916 aa32.18■■■□□ 2.74
RSPO4-202ENST00000400634 YY1P25490 414 aa32.18■■■□□ 2.74
RSPO4-202ENST00000400634 DNAJC10Q8IXB1 793 aa32.18■■■□□ 2.74
RSPO4-202ENST00000400634 NLGN1Q8N2Q7 840 aa32.18■■■□□ 2.74
RSPO4-202ENST00000400634 GOLGB1Q14789 3259 aaKnown RBP32.17■■■□□ 2.74
RSPO4-202ENST00000400634 NLGN2Q8NFZ4 835 aa32.17■■■□□ 2.74
RSPO4-202ENST00000400634 GPR162Q16538 588 aa32.16■■■□□ 2.74
RSPO4-202ENST00000400634 RTF1Q92541 710 aaKnown RBP32.16■■■□□ 2.74
RSPO4-202ENST00000400634 ZEB1P37275 1124 aaPredicted RBP32.15■■■□□ 2.74
RSPO4-202ENST00000400634 CCDC87Q9NVE4 849 aa32.15■■■□□ 2.74
RSPO4-202ENST00000400634 INTS5Q6P9B9 1019 aaKnown RBP32.14■■■□□ 2.74
RSPO4-202ENST00000400634 ZNF790Q6PG37 636 aa32.14■■■□□ 2.74
RSPO4-202ENST00000400634 CYP19A1P11511 503 aaPredicted RBP32.13■■■□□ 2.73
RSPO4-202ENST00000400634 PNNQ9H307 717 aaKnown RBP32.13■■■□□ 2.73
RSPO4-202ENST00000400634 HTATSF1O43719 755 aaKnown RBP32.12■■■□□ 2.73
RSPO4-202ENST00000400634 MMP10P09238 476 aa32.12■■■□□ 2.73
RSPO4-202ENST00000400634 GYS1P13807 737 aa32.11■■■□□ 2.73
RSPO4-202ENST00000400634 DLG5Q8TDM6 1919 aa32.1■■■□□ 2.73
RSPO4-202ENST00000400634 STARD3NLO95772 234 aa32.09■■■□□ 2.73
RSPO4-202ENST00000400634 PELP1Q8IZL8 1130 aaKnown RBP32.09■■■□□ 2.73
RSPO4-202ENST00000400634 TEX13AQ9BXU3 409 aaPredicted RBP32.09■■■□□ 2.73
RSPO4-202ENST00000400634 USP42Q9H9J4 1324 aaKnown RBP32.08■■■□□ 2.73
RSPO4-202ENST00000400634 BTBD11A6QL63 1104 aa32.08■■■□□ 2.73
RSPO4-202ENST00000400634 ZNF496Q96IT1 587 aaPredicted RBP32.08■■■□□ 2.73
RSPO4-202ENST00000400634 HEG1Q9ULI3 1381 aa32.07■■■□□ 2.73
RSPO4-202ENST00000400634 KIF13BQ9NQT8 1826 aa32.07■■■□□ 2.73
RSPO4-202ENST00000400634 SOS1Q07889 1333 aaPredicted RBP32.07■■■□□ 2.72
RSPO4-202ENST00000400634 FMNL2Q96PY5 1086 aa32.07■■■□□ 2.72
RSPO4-202ENST00000400634 MYBBP1AQ9BQG0 1328 aaKnown RBP32.06■■■□□ 2.72
RSPO4-202ENST00000400634 MCM10Q7L590 875 aa32.05■■■□□ 2.72
RSPO4-202ENST00000400634 GRIN3BO60391 1043 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms