RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
APOB-202ENST00000399256 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
APOB-202ENST00000399256 SLIT1O75093 1534 aa17■□□□□ 0.31
APOB-202ENST00000399256 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
APOB-202ENST00000399256 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
APOB-202ENST00000399256 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 MCM10Q7L590 875 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
APOB-202ENST00000399256 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 EXOC6BQ9Y2D4 811 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 CUL4AQ13619 759 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 HMMRO75330 724 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 TSC1Q92574 1164 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 ATP7BP35670 1465 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 MCM2P49736 904 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 F6X3S4 739 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 MCCP23508 829 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 PTPRCP08575 1304 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 LTKP29376 864 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 C17orf53Q8N3J3 647 aaPredicted RBP16.95■□□□□ 0.3
APOB-202ENST00000399256 COG3Q96JB2 828 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 CHL1O00533 1208 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 G2E3Q7L622 706 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 PHF14O94880 888 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 INTS4Q96HW7 963 aaKnown RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 SMAP1Q8IYB5 467 aaPredicted RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
APOB-202ENST00000399256 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 CHMLP26374 656 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 METP08581 1390 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 MX1P20591 662 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 ADCY5O95622 1261 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 NOLC1Q14978 699 aaKnown RBP eCLIP16.91■□□□□ 0.32e-45■■□□□ 12.7
APOB-202ENST00000399256 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
APOB-202ENST00000399256 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 CPS1P31327 1500 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 ANAPC15P60006 121 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 GNAI2P04899 355 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 IL25Q9H293 177 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
APOB-202ENST00000399256 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
APOB-202ENST00000399256 RPAP1Q9BWH6 1393 aaPredicted RBP16.87■□□□□ 0.29
APOB-202ENST00000399256 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
APOB-202ENST00000399256 TECPR2O15040 1411 aa16.86■□□□□ 0.29
APOB-202ENST00000399256 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
APOB-202ENST00000399256 TCHHQ07283 1943 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 DTNBO60941 627 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
APOB-202ENST00000399256 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 DIP2AQ14689 1571 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 FIBPO43427 364 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 FOXO3O43524 673 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms