RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
COL25A1-201ENST00000399126 KCNQ3O43525 872 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 LTBP4Q8N2S1 1624 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 ABCC4O15439 1325 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 RAPGEF4Q8WZA2 1011 aa19.22■□□□□ 0.67
COL25A1-201ENST00000399126 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
COL25A1-201ENST00000399126 G2E3Q7L622 706 aa19.21■□□□□ 0.67
COL25A1-201ENST00000399126 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
COL25A1-201ENST00000399126 RGS12O14924 1447 aa19.21■□□□□ 0.67
COL25A1-201ENST00000399126 RNMTO43148 476 aaKnown RBP19.2■□□□□ 0.66
COL25A1-201ENST00000399126 ABCC6O95255 1503 aa19.2■□□□□ 0.66
COL25A1-201ENST00000399126 RGS3P49796 1198 aa19.2■□□□□ 0.66
COL25A1-201ENST00000399126 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
COL25A1-201ENST00000399126 TEFQ10587 303 aa19.19■□□□□ 0.66
COL25A1-201ENST00000399126 AAMPQ13685 434 aa19.19■□□□□ 0.66
COL25A1-201ENST00000399126 C1orf115Q9H7X2 142 aa19.19■□□□□ 0.66
COL25A1-201ENST00000399126 ZBTB7BO15156 539 aaPredicted RBP19.18■□□□□ 0.66
COL25A1-201ENST00000399126 TATP17735 454 aaPredicted RBP19.18■□□□□ 0.66
COL25A1-201ENST00000399126 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
COL25A1-201ENST00000399126 COL5A2P05997 1499 aaPredicted RBP19.17■□□□□ 0.66
COL25A1-201ENST00000399126 BTBD11A6QL63 1104 aa19.17■□□□□ 0.66
COL25A1-201ENST00000399126 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
COL25A1-201ENST00000399126 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
COL25A1-201ENST00000399126 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
COL25A1-201ENST00000399126 BABAM1Q9NWV8 329 aa19.16■□□□□ 0.66
COL25A1-201ENST00000399126 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
COL25A1-201ENST00000399126 KDM6AO15550 1401 aaPredicted RBP19.15■□□□□ 0.66
COL25A1-201ENST00000399126 TOM1L2Q6ZVM7 507 aa19.15■□□□□ 0.66
COL25A1-201ENST00000399126 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
COL25A1-201ENST00000399126 F6X3S4 739 aa19.15■□□□□ 0.66
COL25A1-201ENST00000399126 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.15■□□□□ 0.66
COL25A1-201ENST00000399126 CYP27B1O15528 508 aa19.14■□□□□ 0.65
COL25A1-201ENST00000399126 PHKG2P15735 406 aa19.14■□□□□ 0.65
COL25A1-201ENST00000399126 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
COL25A1-201ENST00000399126 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
COL25A1-201ENST00000399126 LARP1Q6PKG0 1096 aaKnown RBP19.13■□□□□ 0.65
COL25A1-201ENST00000399126 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
COL25A1-201ENST00000399126 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
COL25A1-201ENST00000399126 PKD1L3Q7Z443 1732 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 SPG7Q9UQ90 795 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 PTPRCP08575 1304 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 PDE4AP27815 886 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
COL25A1-201ENST00000399126 PRAMEF22A3QJZ6 481 aa19.11■□□□□ 0.65
COL25A1-201ENST00000399126 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
COL25A1-201ENST00000399126 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
COL25A1-201ENST00000399126 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
COL25A1-201ENST00000399126 FLIIQ13045 1269 aa19.1■□□□□ 0.65
COL25A1-201ENST00000399126 SLC39A6Q13433 755 aa19.1■□□□□ 0.65
COL25A1-201ENST00000399126 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
COL25A1-201ENST00000399126 SLC4A10Q6U841 1118 aa19.1■□□□□ 0.65
COL25A1-201ENST00000399126 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
COL25A1-201ENST00000399126 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
COL25A1-201ENST00000399126 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
COL25A1-201ENST00000399126 ANXA1P04083 346 aa19.09■□□□□ 0.65
COL25A1-201ENST00000399126 IFNL2Q8IZJ0 200 aa19.09■□□□□ 0.65
COL25A1-201ENST00000399126 PHAXQ9H814 394 aaKnown RBP19.09■□□□□ 0.65
COL25A1-201ENST00000399126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
COL25A1-201ENST00000399126 NFATC2IPQ8NCF5 419 aa19.09■□□□□ 0.65
COL25A1-201ENST00000399126 FKBP5Q13451 457 aaPredicted RBP19.08■□□□□ 0.65
COL25A1-201ENST00000399126 SIRT2Q8IXJ6 389 aa19.08■□□□□ 0.65
COL25A1-201ENST00000399126 BACH2Q9BYV9 841 aa19.08■□□□□ 0.64
COL25A1-201ENST00000399126 BTG4Q9NY30 223 aa19.08■□□□□ 0.64
COL25A1-201ENST00000399126 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.64
COL25A1-201ENST00000399126 EVA1CP58658 441 aa19.08■□□□□ 0.64
COL25A1-201ENST00000399126 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
COL25A1-201ENST00000399126 CHPF2Q9P2E5 772 aa19.08■□□□□ 0.64
COL25A1-201ENST00000399126 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
COL25A1-201ENST00000399126 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
COL25A1-201ENST00000399126 MEIS3Q99687 375 aa19.07■□□□□ 0.64
COL25A1-201ENST00000399126 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
COL25A1-201ENST00000399126 SOS1Q07889 1333 aaPredicted RBP19.05■□□□□ 0.64
COL25A1-201ENST00000399126 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
COL25A1-201ENST00000399126 COL16A1Q07092 1604 aaPredicted RBP19.05■□□□□ 0.64
COL25A1-201ENST00000399126 PHLPP1O60346 1717 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 DCAF5Q96JK2 942 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 SHANK3Q9BYB0 1731 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
COL25A1-201ENST00000399126 ZCRB1Q8TBF4 217 aaKnown RBP19.04■□□□□ 0.64
COL25A1-201ENST00000399126 IL2RBP14784 551 aa19.03■□□□□ 0.64
COL25A1-201ENST00000399126 PROSER3Q2NL68 480 aa19.03■□□□□ 0.64
COL25A1-201ENST00000399126 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
COL25A1-201ENST00000399126 IGSF3O75054 1194 aa19.03■□□□□ 0.64
COL25A1-201ENST00000399126 HOXB7P09629 217 aa19.03■□□□□ 0.64
COL25A1-201ENST00000399126 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
COL25A1-201ENST00000399126 C5P01031 1676 aa19.02■□□□□ 0.64
COL25A1-201ENST00000399126 ATP10DQ9P241 1426 aa19.02■□□□□ 0.64
COL25A1-201ENST00000399126 DDX54Q8TDD1 881 aaKnown RBP19.02■□□□□ 0.63
COL25A1-201ENST00000399126 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.63
COL25A1-201ENST00000399126 MRC1P22897 1456 aa19.01■□□□□ 0.63
COL25A1-201ENST00000399126 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
COL25A1-201ENST00000399126 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
COL25A1-201ENST00000399126 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
COL25A1-201ENST00000399126 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms