RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
BRCC3-205ENST00000399026 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
BRCC3-205ENST00000399026 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
BRCC3-205ENST00000399026 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
BRCC3-205ENST00000399026 INSRP06213 1382 aa11.4□□□□□ -0.59
BRCC3-205ENST00000399026 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.59
BRCC3-205ENST00000399026 MEGF6O75095 1541 aa11.4□□□□□ -0.59
BRCC3-205ENST00000399026 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
BRCC3-205ENST00000399026 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
BRCC3-205ENST00000399026 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
BRCC3-205ENST00000399026 CARD10Q9BWT7 1032 aa11.39□□□□□ -0.59
BRCC3-205ENST00000399026 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
BRCC3-205ENST00000399026 RGL2O15211 777 aa11.38□□□□□ -0.59
BRCC3-205ENST00000399026 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
BRCC3-205ENST00000399026 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
BRCC3-205ENST00000399026 BOLA1Q9Y3E2 137 aa11.38□□□□□ -0.59
BRCC3-205ENST00000399026 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
BRCC3-205ENST00000399026 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
BRCC3-205ENST00000399026 PKD1L3Q7Z443 1732 aa11.37□□□□□ -0.59
BRCC3-205ENST00000399026 DDX10Q13206 875 aaKnown RBP11.36□□□□□ -0.59
BRCC3-205ENST00000399026 NBPF6Q5VWK0 638 aa11.36□□□□□ -0.59
BRCC3-205ENST00000399026 NBPF4Q96M43 638 aa11.36□□□□□ -0.59
BRCC3-205ENST00000399026 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
BRCC3-205ENST00000399026 SBF2Q86WG5 1849 aa11.36□□□□□ -0.59
BRCC3-205ENST00000399026 COL3A1P02461 1466 aaPredicted RBP11.36□□□□□ -0.59
BRCC3-205ENST00000399026 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
BRCC3-205ENST00000399026 DOT1LQ8TEK3 1739 aa11.35□□□□□ -0.59
BRCC3-205ENST00000399026 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
BRCC3-205ENST00000399026 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRCC3-205ENST00000399026 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
BRCC3-205ENST00000399026 IL2RBP14784 551 aa11.34□□□□□ -0.59
BRCC3-205ENST00000399026 DDB1Q16531 1140 aa11.34□□□□□ -0.59
BRCC3-205ENST00000399026 NHSQ6T4R5 1651 aa11.33□□□□□ -0.6
BRCC3-205ENST00000399026 ST18O60284 1047 aa11.33□□□□□ -0.6
BRCC3-205ENST00000399026 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
BRCC3-205ENST00000399026 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 G3V3G9 751 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 MTHFSP49914 203 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-205ENST00000399026 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-205ENST00000399026 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
BRCC3-205ENST00000399026 STK25O00506 426 aa11.31□□□□□ -0.6
BRCC3-205ENST00000399026 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-205ENST00000399026 EYA1Q99502 592 aa11.31□□□□□ -0.6
BRCC3-205ENST00000399026 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
BRCC3-205ENST00000399026 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-205ENST00000399026 SNPHO15079 494 aa11.3□□□□□ -0.6
BRCC3-205ENST00000399026 EXOC5O00471 708 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 PPP2R1AP30153 589 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 AEBP1Q8IUX7 1158 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 BTAF1O14981 1849 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 RREB1Q92766 1687 aa11.29□□□□□ -0.6
BRCC3-205ENST00000399026 TRIM37O94972 964 aa11.28□□□□□ -0.6
BRCC3-205ENST00000399026 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-205ENST00000399026 IL13P35225 146 aa11.28□□□□□ -0.6
BRCC3-205ENST00000399026 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
BRCC3-205ENST00000399026 NUP188Q5SRE5 1749 aa11.28□□□□□ -0.6
BRCC3-205ENST00000399026 RGPD3A6NKT7 1758 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-205ENST00000399026 RGPD4Q7Z3J3 1758 aa11.27□□□□□ -0.61
BRCC3-205ENST00000399026 DDX54Q8TDD1 881 aaKnown RBP11.27□□□□□ -0.61
BRCC3-205ENST00000399026 VIRMAQ69YN4 1812 aaKnown RBP11.26□□□□□ -0.61
BRCC3-205ENST00000399026 DIAPH1O60610 1272 aaKnown RBP11.26□□□□□ -0.61
BRCC3-205ENST00000399026 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
BRCC3-205ENST00000399026 PTF1AQ7RTS3 328 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 DEFB132Q7Z7B7 95 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
BRCC3-205ENST00000399026 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 KDRP35968 1356 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 BCL9O00512 1426 aa11.26□□□□□ -0.61
BRCC3-205ENST00000399026 ITGB4P16144 1822 aa11.25□□□□□ -0.61
BRCC3-205ENST00000399026 HMOX1P09601 288 aa11.25□□□□□ -0.61
BRCC3-205ENST00000399026 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
BRCC3-205ENST00000399026 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
BRCC3-205ENST00000399026 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
BRCC3-205ENST00000399026 CFAP53Q96M91 514 aa11.24□□□□□ -0.61
BRCC3-205ENST00000399026 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
BRCC3-205ENST00000399026 CYP27B1O15528 508 aa11.23□□□□□ -0.61
BRCC3-205ENST00000399026 KCNQ2O43526 872 aa11.23□□□□□ -0.61
BRCC3-205ENST00000399026 BAG6P46379 1132 aa11.23□□□□□ -0.61
BRCC3-205ENST00000399026 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
BRCC3-205ENST00000399026 APBA3O96018 575 aa11.22□□□□□ -0.61
BRCC3-205ENST00000399026 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
BRCC3-205ENST00000399026 RALBP1Q15311 655 aa11.22□□□□□ -0.61
BRCC3-205ENST00000399026 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
BRCC3-205ENST00000399026 MYBBP1AQ9BQG0 1328 aaKnown RBP11.22□□□□□ -0.61
BRCC3-205ENST00000399026 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
BRCC3-205ENST00000399026 KDM6AO15550 1401 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-205ENST00000399026 PLEKHG2Q9H7P9 1386 aa11.21□□□□□ -0.61
BRCC3-205ENST00000399026 EZH2Q15910 746 aaKnown RBP11.21□□□□□ -0.61
BRCC3-205ENST00000399026 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-205ENST00000399026 SYTL4Q96C24 671 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-205ENST00000399026 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
BRCC3-205ENST00000399026 LY75O60449 1722 aa11.21□□□□□ -0.62
BRCC3-205ENST00000399026 PRKRIP1Q9H875 184 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms