RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 SERTAD1Q9UHV2 236 aa9.13□□□□□ -0.95
CEP290-202ENST00000397838 ZBTB39O15060 712 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 IGFBP4P22692 258 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
CEP290-202ENST00000397838 DSC3Q14574 896 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
CEP290-202ENST00000397838 ATCAYQ86WG3 371 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 PIK3R5Q8WYR1 880 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
CEP290-202ENST00000397838 S1PR4O95977 384 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 CDK11BP21127 795 aaKnown RBP9.12□□□□□ -0.95
CEP290-202ENST00000397838 NT5DC4Q86YG4 428 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 PCDH10Q9P2E7 1040 aa9.12□□□□□ -0.95
CEP290-202ENST00000397838 CDK11AQ9UQ88 783 aaPredicted RBP9.12□□□□□ -0.95
CEP290-202ENST00000397838 TNFRSF10BO14763 440 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 SLC6A16Q9GZN6 736 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 ATAD2Q6PL18 1390 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 GDF10P55107 478 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 LRFN2Q9ULH4 789 aa9.11□□□□□ -0.95
CEP290-202ENST00000397838 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
CEP290-202ENST00000397838 FAM13AO94988 1023 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 EHHADHQ08426 723 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 COX20Q5RI15 118 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 FOXO3O43524 673 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 LDHBP07195 334 aaKnown RBP9.1□□□□□ -0.95
CEP290-202ENST00000397838 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 TMEM87AQ8NBN3 555 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 UBXN4Q92575 508 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 USP3Q9Y6I4 520 aa9.1□□□□□ -0.95
CEP290-202ENST00000397838 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
CEP290-202ENST00000397838 FANCCQ00597 558 aa9.09□□□□□ -0.96
CEP290-202ENST00000397838 C16orf46Q6P387 395 aa9.09□□□□□ -0.96
CEP290-202ENST00000397838 GIMAP6Q6P9H5 292 aa9.09□□□□□ -0.96
CEP290-202ENST00000397838 CYLDQ9NQC7 956 aa9.09□□□□□ -0.96
CEP290-202ENST00000397838 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
CEP290-202ENST00000397838 NDUFB5O43674 189 aa9.08□□□□□ -0.96
CEP290-202ENST00000397838 MYCP01106 439 aaPredicted RBP9.08□□□□□ -0.96
CEP290-202ENST00000397838 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
CEP290-202ENST00000397838 TINF2Q9BSI4 451 aa9.08□□□□□ -0.96
CEP290-202ENST00000397838 BRPF3Q9ULD4 1205 aa9.08□□□□□ -0.96
CEP290-202ENST00000397838 TNNI2P48788 182 aa9.07□□□□□ -0.96
CEP290-202ENST00000397838 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
CEP290-202ENST00000397838 PRKD2Q9BZL6 878 aa9.07□□□□□ -0.96
CEP290-202ENST00000397838 QTRT2Q9H974 415 aaKnown RBP9.07□□□□□ -0.96
CEP290-202ENST00000397838 THSD4Q6ZMP0 1018 aa9.07□□□□□ -0.96
CEP290-202ENST00000397838 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
CEP290-202ENST00000397838 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
CEP290-202ENST00000397838 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
CEP290-202ENST00000397838 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
CEP290-202ENST00000397838 INHAP05111 366 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 HMGB1P09429 215 aaKnown RBP9.05□□□□□ -0.96
CEP290-202ENST00000397838 SKOR1P84550 965 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 AAMPQ13685 434 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 FAM129BQ96TA1 746 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 POTEMA6NI47 508 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
CEP290-202ENST00000397838 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
CEP290-202ENST00000397838 PRPF40AO75400 957 aaKnown RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 PLA2G2CQ5R387 149 aa9.04□□□□□ -0.96
CEP290-202ENST00000397838 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 DPH6Q7L8W6 267 aa9.04□□□□□ -0.96
CEP290-202ENST00000397838 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 PPP1R12BO60237 982 aaPredicted RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 DAB2P98082 770 aa9.04□□□□□ -0.96
CEP290-202ENST00000397838 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 TMC4Q7Z404 712 aa9.04□□□□□ -0.96
CEP290-202ENST00000397838 SLC9A9Q8IVB4 645 aa9.04□□□□□ -0.96
CEP290-202ENST00000397838 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
CEP290-202ENST00000397838 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 DHX38Q92620 1227 aaKnown RBP9.03□□□□□ -0.96
CEP290-202ENST00000397838 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 STIM2Q9P246 746 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 FOXK2Q01167 660 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
CEP290-202ENST00000397838 SORBS3O60504 671 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 FSHRP23945 695 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 KCTD12Q96CX2 325 aaKnown RBP9.02□□□□□ -0.97
CEP290-202ENST00000397838 TANGO6Q9C0B7 1094 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 VTI1BQ9UEU0 232 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
CEP290-202ENST00000397838 ARID5BQ14865 1188 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
CEP290-202ENST00000397838 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
CEP290-202ENST00000397838 POLIQ9UNA4 740 aa9.01□□□□□ -0.97
CEP290-202ENST00000397838 PNMA6FA0A0J9YX94 578 aa9.01□□□□□ -0.97
CEP290-202ENST00000397838 ETFBKMTQ8IXQ9 262 aa9.01□□□□□ -0.97
CEP290-202ENST00000397838 LILRA1O75019 489 aa9□□□□□ -0.97
CEP290-202ENST00000397838 CTSHP09668 335 aa9□□□□□ -0.97
CEP290-202ENST00000397838 PSMD2Q13200 908 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms