RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 PRDM11Q9NQV5 511 aa7.3□□□□□ -1.24
PGBD4-201ENST00000397766 ZSCAN12O43309 604 aa7.3□□□□□ -1.24
PGBD4-201ENST00000397766 WDHD1O75717 1129 aaPredicted RBP7.3□□□□□ -1.24
PGBD4-201ENST00000397766 NEFHP12036 1026 aa7.3□□□□□ -1.24
PGBD4-201ENST00000397766 EHMT1Q9H9B1 1298 aa7.3□□□□□ -1.24
PGBD4-201ENST00000397766 SEC63Q9UGP8 760 aaKnown RBP7.3□□□□□ -1.24
PGBD4-201ENST00000397766 FGFR1OPO95684 399 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 SPC24Q8NBT2 197 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 DDX54Q8TDD1 881 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 LRP2BPQ9P2M1 347 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 EPB41L2O43491 1005 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 USP8P40818 1118 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 RBM5P52756 815 aaKnown RBP eCLIP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 NBPF8Q3BBV2 869 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 SLF2Q8IX21 1173 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 SCAND2PQ9GZW5 306 aaPredicted RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 ZHX3Q9H4I2 956 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 CTAGE5O15320 804 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 TMPOP42166 694 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 CAVIN4Q5BKX8 364 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 CWC27Q6UX04 472 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 NUDT16Q96DE0 195 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 PYM1Q9BRP8 204 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 IFIT1P09914 478 aaKnown RBP7.29□□□□□ -1.24
PGBD4-201ENST00000397766 FAM135AQ9P2D6 1515 aa7.29□□□□□ -1.24
PGBD4-201ENST00000397766 FKBP15Q5T1M5 1219 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 RNF41Q9H4P4 317 aaPredicted RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 CD109Q6YHK3 1445 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 EIF5P55010 431 aaKnown RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 ANO10Q9NW15 660 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 CCDC61Q9Y6R9 512 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 LRPPRCP42704 1394 aaKnown RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 PPP4R3AQ6IN85 833 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 PTPRCP08575 1304 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 MAP4K4O95819 1239 aaPredicted RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 CASTP20810 708 aaKnown RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 ENOX2Q16206 610 aaKnown RBP7.28□□□□□ -1.24
PGBD4-201ENST00000397766 MCM4P33991 863 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 KIAA1328Q86T90 577 aa7.28□□□□□ -1.24
PGBD4-201ENST00000397766 NEMFO60524 1076 aa7.27□□□□□ -1.24
PGBD4-201ENST00000397766 METTL24Q5JXM2 366 aa7.27□□□□□ -1.24
PGBD4-201ENST00000397766 VPS36Q86VN1 386 aa7.27□□□□□ -1.24
PGBD4-201ENST00000397766 FBXO3Q9UK99 471 aa7.27□□□□□ -1.24
PGBD4-201ENST00000397766 NCOA1Q15788 1441 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 SPA17Q15506 151 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 ARHGAP29Q52LW3 1261 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TMOD3Q9NYL9 352 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TTC21BQ7Z4L5 1316 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 MAGI1Q96QZ7 1491 aaPredicted RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 NEBLO76041 1014 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 SLC5A1P13866 664 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TAF7Q15545 349 aaPredicted RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 CCDC183Q5T5S1 534 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 INCENPQ9NQS7 918 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 KIF14Q15058 1648 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 MAP3K1Q13233 1512 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TMEM266Q2M3C6 531 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 SEPT11Q9NVA2 429 aaKnown RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 HYPKQ9NX55 129 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 MAP3K12Q12852 859 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 MAP9Q49MG5 647 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TMEM57Q8N5G2 664 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TEX13AQ9BXU3 409 aaPredicted RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 CAMSAP2Q08AD1 1489 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 POTEB2H3BUK9 544 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 TTF1Q15361 905 aaPredicted RBP7.27□□□□□ -1.25
PGBD4-201ENST00000397766 NBPF14Q5TI25 921 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 CCDC91Q7Z6B0 441 aa7.27□□□□□ -1.25
PGBD4-201ENST00000397766 IDH1O75874 414 aaKnown RBP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 CUL5Q93034 780 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 MATR3P43243 847 aaKnown RBP eCLIP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 RRS1Q15050 365 aaKnown RBP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 SKIDA1Q1XH10 827 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 CCDC12Q8WUD4 166 aaPredicted RBP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 TAF3Q5VWG9 929 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 CTCFLQ8NI51 663 aaPredicted RBP7.26□□□□□ -1.25
PGBD4-201ENST00000397766 SLC26A8Q96RN1 970 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 CUL7Q14999 1698 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 ANKRD62A6NC57 917 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 USP5P45974 858 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 IQGAP2Q13576 1575 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 ADAMTS2O95450 1211 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 NUTM1Q86Y26 1132 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 LRRC27Q9C0I9 530 aa7.26□□□□□ -1.25
PGBD4-201ENST00000397766 UQCRHLA0A096LP55 91 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 UQCRHP07919 91 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 SFPQP23246 707 aaKnown RBP eCLIP7.25□□□□□ -1.25
PGBD4-201ENST00000397766 ABCA10Q8WWZ4 1543 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 ZPR1O75312 459 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 POLR3DP05423 398 aaPredicted RBP7.25□□□□□ -1.25
PGBD4-201ENST00000397766 CFAP100Q494V2 611 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
PGBD4-201ENST00000397766 IL1RAPL2Q9NP60 686 aa7.25□□□□□ -1.25
PGBD4-201ENST00000397766 IL16Q14005 1332 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms