RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 TMPOP42166 694 aaKnown RBP21.31■■□□□ 1
RBM39-205ENST00000397370 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
RBM39-205ENST00000397370 SMARCC1Q92922 1105 aaPredicted RBP21.31■■□□□ 1
RBM39-205ENST00000397370 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
RBM39-205ENST00000397370 CCER2I3L3R5 266 aa21.3■■□□□ 1
RBM39-205ENST00000397370 ATG3Q9NT62 314 aa21.3■■□□□ 1
RBM39-205ENST00000397370 ASAP1Q9ULH1 1129 aa21.3■■□□□ 1
RBM39-205ENST00000397370 PALLDQ8WX93 1383 aa21.29■■□□□ 1
RBM39-205ENST00000397370 DCTN1Q14203 1278 aa21.29■■□□□ 1
RBM39-205ENST00000397370 MCM10Q7L590 875 aa21.29■■□□□ 1
RBM39-205ENST00000397370 RIPK4P57078 832 aa21.28■■□□□ 1
RBM39-205ENST00000397370 TEFQ10587 303 aa21.28■■□□□ 1
RBM39-205ENST00000397370 MIER1Q8N108 512 aa21.28■■□□□ 1
RBM39-205ENST00000397370 RRP7AQ9Y3A4 280 aaKnown RBP21.27■■□□□ 1
RBM39-205ENST00000397370 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
RBM39-205ENST00000397370 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
RBM39-205ENST00000397370 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
RBM39-205ENST00000397370 APAF1O14727 1248 aa21.25■□□□□ 0.99
RBM39-205ENST00000397370 NEUROD2Q15784 382 aa21.25■□□□□ 0.99
RBM39-205ENST00000397370 LRRC4BQ9NT99 713 aa21.25■□□□□ 0.99
RBM39-205ENST00000397370 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
RBM39-205ENST00000397370 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
RBM39-205ENST00000397370 TAF1LQ8IZX4 1826 aa21.24■□□□□ 0.99
RBM39-205ENST00000397370 LOC102724428A0A0B4J2F2 783 aa21.23■□□□□ 0.99
RBM39-205ENST00000397370 KCNQ4P56696 695 aa21.23■□□□□ 0.99
RBM39-205ENST00000397370 SIK1P57059 783 aa21.23■□□□□ 0.99
RBM39-205ENST00000397370 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
RBM39-205ENST00000397370 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
RBM39-205ENST00000397370 ZNF831Q5JPB2 1677 aa21.21■□□□□ 0.99
RBM39-205ENST00000397370 UBR2Q8IWV8 1755 aa21.21■□□□□ 0.99
RBM39-205ENST00000397370 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
RBM39-205ENST00000397370 TRIM35Q9UPQ4 493 aa21.21■□□□□ 0.99
RBM39-205ENST00000397370 C5P01031 1676 aa21.21■□□□□ 0.99
RBM39-205ENST00000397370 NBPF14Q5TI25 921 aa21.2■□□□□ 0.98
RBM39-205ENST00000397370 BTBD11A6QL63 1104 aa21.19■□□□□ 0.98
RBM39-205ENST00000397370 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
RBM39-205ENST00000397370 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
RBM39-205ENST00000397370 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
RBM39-205ENST00000397370 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
RBM39-205ENST00000397370 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
RBM39-205ENST00000397370 ATP6V1AP38606 617 aa21.18■□□□□ 0.98
RBM39-205ENST00000397370 ZNF790Q6PG37 636 aa21.18■□□□□ 0.98
RBM39-205ENST00000397370 ITPK1Q13572 414 aa21.17■□□□□ 0.98
RBM39-205ENST00000397370 TTC5Q8N0Z6 440 aa21.17■□□□□ 0.98
RBM39-205ENST00000397370 KDM3BQ7LBC6 1761 aa21.16■□□□□ 0.98
RBM39-205ENST00000397370 HMGB2P26583 209 aaKnown RBP21.16■□□□□ 0.98
RBM39-205ENST00000397370 STK32BQ9NY57 414 aa21.16■□□□□ 0.98
RBM39-205ENST00000397370 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
RBM39-205ENST00000397370 TJP1Q07157 1748 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
RBM39-205ENST00000397370 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 KCNQ3O43525 872 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 SLC15A2Q16348 729 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 AKT1S1Q96B36 256 aa21.15■□□□□ 0.98
RBM39-205ENST00000397370 R3HDM1Q15032 1099 aaKnown RBP21.14■□□□□ 0.97
RBM39-205ENST00000397370 ZNF827Q17R98 1081 aa21.14■□□□□ 0.97
RBM39-205ENST00000397370 LINC00116Q8NCU8 138 aa21.14■□□□□ 0.97
RBM39-205ENST00000397370 ZNF496Q96IT1 587 aaPredicted RBP21.14■□□□□ 0.97
RBM39-205ENST00000397370 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
RBM39-205ENST00000397370 TUBGCP6Q96RT7 1819 aa21.13■□□□□ 0.97
RBM39-205ENST00000397370 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
RBM39-205ENST00000397370 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
RBM39-205ENST00000397370 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
RBM39-205ENST00000397370 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
RBM39-205ENST00000397370 FMNL2Q96PY5 1086 aa21.12■□□□□ 0.97
RBM39-205ENST00000397370 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
RBM39-205ENST00000397370 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
RBM39-205ENST00000397370 MYH14Q7Z406 1995 aaKnown RBP21.11■□□□□ 0.97
RBM39-205ENST00000397370 BABAM1Q9NWV8 329 aa21.11■□□□□ 0.97
RBM39-205ENST00000397370 DNAJC10Q8IXB1 793 aa21.1■□□□□ 0.97
RBM39-205ENST00000397370 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
RBM39-205ENST00000397370 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
RBM39-205ENST00000397370 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.97
RBM39-205ENST00000397370 WWC1Q8IX03 1113 aa21.08■□□□□ 0.97
RBM39-205ENST00000397370 AK7Q96M32 723 aa21.08■□□□□ 0.97
RBM39-205ENST00000397370 TFCP2L1Q9NZI6 479 aa21.08■□□□□ 0.97
RBM39-205ENST00000397370 SALL2Q9Y467 1007 aaPredicted RBP21.08■□□□□ 0.97
RBM39-205ENST00000397370 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
RBM39-205ENST00000397370 CNTNAP4Q9C0A0 1308 aa21.07■□□□□ 0.96
RBM39-205ENST00000397370 CHL1O00533 1208 aa21.07■□□□□ 0.96
RBM39-205ENST00000397370 RC3H1Q5TC82 1133 aaKnown RBP21.07■□□□□ 0.96
RBM39-205ENST00000397370 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
RBM39-205ENST00000397370 CASZ1Q86V15 1759 aa21.06■□□□□ 0.96
RBM39-205ENST00000397370 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
RBM39-205ENST00000397370 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
RBM39-205ENST00000397370 CFAP44Q96MT7 982 aa21.06■□□□□ 0.96
RBM39-205ENST00000397370 TEX13AQ9BXU3 409 aaPredicted RBP21.06■□□□□ 0.96
RBM39-205ENST00000397370 ZNF853P0CG23 659 aa21.05■□□□□ 0.96
RBM39-205ENST00000397370 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
RBM39-205ENST00000397370 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
RBM39-205ENST00000397370 GNPATO15228 680 aa21.04■□□□□ 0.96
RBM39-205ENST00000397370 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
RBM39-205ENST00000397370 PDGFDQ9GZP0 370 aaPredicted RBP21.04■□□□□ 0.96
RBM39-205ENST00000397370 IFT57Q9NWB7 429 aa21.04■□□□□ 0.96
RBM39-205ENST00000397370 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
RBM39-205ENST00000397370 STARD3NLO95772 234 aa21.03■□□□□ 0.96
RBM39-205ENST00000397370 GNAI1P63096 354 aa21.03■□□□□ 0.96
RBM39-205ENST00000397370 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
RBM39-205ENST00000397370 AMIGO3Q86WK7 504 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms