RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PTK7Q13308 1070 aa8.18□□□□□ -1.1
CMC1-202ENST00000396610 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
CMC1-202ENST00000396610 ZBTB7BO15156 539 aaPredicted RBP8.17□□□□□ -1.1
CMC1-202ENST00000396610 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
CMC1-202ENST00000396610 CCDC102BQ68D86 513 aa8.17□□□□□ -1.1
CMC1-202ENST00000396610 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
CMC1-202ENST00000396610 SIX5Q8N196 739 aa8.17□□□□□ -1.1
CMC1-202ENST00000396610 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
CMC1-202ENST00000396610 CNKSR1Q969H4 720 aa8.17□□□□□ -1.1
CMC1-202ENST00000396610 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
CMC1-202ENST00000396610 DKK1O94907 266 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 INHAP05111 366 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 SOS2Q07890 1332 aaPredicted RBP8.16□□□□□ -1.1
CMC1-202ENST00000396610 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
CMC1-202ENST00000396610 RNF217Q8TC41 542 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 SLC16A10Q8TF71 515 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
CMC1-202ENST00000396610 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 DPYDQ12882 1025 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 TLR1Q15399 786 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 XAGE2Q96GT9 111 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 DNMT3LQ9UJW3 386 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 ZMIZ1Q9ULJ6 1067 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
CMC1-202ENST00000396610 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
CMC1-202ENST00000396610 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
CMC1-202ENST00000396610 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
CMC1-202ENST00000396610 ARXQ96QS3 562 aa8.14□□□□□ -1.11
CMC1-202ENST00000396610 FHDC1Q9C0D6 1143 aaPredicted RBP8.14□□□□□ -1.11
CMC1-202ENST00000396610 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
CMC1-202ENST00000396610 FIGNL2A6NMB9 653 aa8.13□□□□□ -1.11
CMC1-202ENST00000396610 ATG7O95352 703 aa8.13□□□□□ -1.11
CMC1-202ENST00000396610 MAN1A2O60476 641 aa8.12□□□□□ -1.11
CMC1-202ENST00000396610 GPC1P35052 558 aa8.12□□□□□ -1.11
CMC1-202ENST00000396610 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
CMC1-202ENST00000396610 CENPCQ03188 943 aa8.12□□□□□ -1.11
CMC1-202ENST00000396610 SLC27A3Q5K4L6 730 aa8.12□□□□□ -1.11
CMC1-202ENST00000396610 NPAS3Q8IXF0 933 aa8.12□□□□□ -1.11
CMC1-202ENST00000396610 NXF1Q9UBU9 619 aaKnown RBP8.12□□□□□ -1.11
CMC1-202ENST00000396610 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
CMC1-202ENST00000396610 PPP1R15AO75807 674 aaPredicted RBP8.11□□□□□ -1.11
CMC1-202ENST00000396610 SEC13P55735 322 aa8.11□□□□□ -1.11
CMC1-202ENST00000396610 TSEN2Q8NCE0 465 aaKnown RBP8.11□□□□□ -1.11
CMC1-202ENST00000396610 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
CMC1-202ENST00000396610 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
CMC1-202ENST00000396610 BACH1O14867 736 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 LGR5O75473 907 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 SMTNP53814 917 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 EPHA4P54764 986 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 ELOAQ14241 798 aaKnown RBP8.1□□□□□ -1.11
CMC1-202ENST00000396610 TNS4Q8IZW8 715 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 SLC4A9Q96Q91 983 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 ZSCAN10Q96SZ4 725 aaPredicted RBP8.1□□□□□ -1.11
CMC1-202ENST00000396610 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
CMC1-202ENST00000396610 A6NJY4 79 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 RHOQP17081 205 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 MTFR1Q15390 333 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 FAM200AQ8TCP9 573 aa8.09□□□□□ -1.11
CMC1-202ENST00000396610 M0R2N6 131 aa8.08□□□□□ -1.12
CMC1-202ENST00000396610 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.08□□□□□ -1.12
CMC1-202ENST00000396610 TBCELQ5QJ74 424 aa8.08□□□□□ -1.12
CMC1-202ENST00000396610 IRF7Q92985 503 aa8.08□□□□□ -1.12
CMC1-202ENST00000396610 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
CMC1-202ENST00000396610 FOXK2Q01167 660 aa8.07□□□□□ -1.12
CMC1-202ENST00000396610 TMEM214Q6NUQ4 689 aaKnown RBP8.07□□□□□ -1.12
CMC1-202ENST00000396610 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
CMC1-202ENST00000396610 TSPAN10Q9H1Z9 355 aaPredicted RBP8.07□□□□□ -1.12
CMC1-202ENST00000396610 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
CMC1-202ENST00000396610 POU4F2Q12837 409 aa8.06□□□□□ -1.12
CMC1-202ENST00000396610 C4orf17Q53FE4 359 aa8.06□□□□□ -1.12
CMC1-202ENST00000396610 GNASQ5JWF2 1037 aa8.06□□□□□ -1.12
CMC1-202ENST00000396610 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
CMC1-202ENST00000396610 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
CMC1-202ENST00000396610 ZNF295-AS1Q8N0V1 137 aa8.06□□□□□ -1.12
CMC1-202ENST00000396610 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
CMC1-202ENST00000396610 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
CMC1-202ENST00000396610 SPATA31C2B4DYI2 1134 aa8.05□□□□□ -1.12
CMC1-202ENST00000396610 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
CMC1-202ENST00000396610 PLA2G4AP47712 749 aa8.05□□□□□ -1.12
CMC1-202ENST00000396610 TAS1R3Q7RTX0 852 aa8.05□□□□□ -1.12
CMC1-202ENST00000396610 RHBDD1Q8TEB9 315 aa8.05□□□□□ -1.12
CMC1-202ENST00000396610 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 CARNS1A5YM72 827 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 PHKA2P46019 1235 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 PTSQ03393 145 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 FAM69CQ0P6D2 419 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 GAS2L2Q8NHY3 880 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 HINFPQ9BQA5 517 aa8.04□□□□□ -1.12
CMC1-202ENST00000396610 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
CMC1-202ENST00000396610 H3BM21 787 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms