RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CLSPNQ9HAW4 1339 aa24.11■■□□□ 1.45
EXOSC3-202ENST00000396521 TGFB2P61812 414 aa24.11■■□□□ 1.45
EXOSC3-202ENST00000396521 TRAPPC3LQ5T215 181 aa24.11■■□□□ 1.45
EXOSC3-202ENST00000396521 RC3H1Q5TC82 1133 aaKnown RBP24.11■■□□□ 1.45
EXOSC3-202ENST00000396521 DCAF5Q96JK2 942 aa24.11■■□□□ 1.45
EXOSC3-202ENST00000396521 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
EXOSC3-202ENST00000396521 EIF4A2Q14240 407 aaKnown RBP24.1■■□□□ 1.45
EXOSC3-202ENST00000396521 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
EXOSC3-202ENST00000396521 MMP10P09238 476 aa24.08■■□□□ 1.45
EXOSC3-202ENST00000396521 HSPA6P17066 643 aa24.08■■□□□ 1.45
EXOSC3-202ENST00000396521 AMOTQ4VCS5 1084 aa24.08■■□□□ 1.45
EXOSC3-202ENST00000396521 PLEKHO1Q53GL0 409 aaPredicted RBP24.08■■□□□ 1.45
EXOSC3-202ENST00000396521 MAP2P11137 1827 aaKnown RBP24.07■■□□□ 1.44
EXOSC3-202ENST00000396521 SMIM5Q71RC9 77 aa24.06■■□□□ 1.44
EXOSC3-202ENST00000396521 IFFO2Q5TF58 517 aa24.05■■□□□ 1.44
EXOSC3-202ENST00000396521 CNTNAP4Q9C0A0 1308 aa24.05■■□□□ 1.44
EXOSC3-202ENST00000396521 KDRP35968 1356 aa24.04■■□□□ 1.44
EXOSC3-202ENST00000396521 RPS6KA4O75676 772 aa24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 RFC4P35249 363 aa24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 ZNF526Q8TF50 670 aaPredicted RBP24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 RBM42Q9BTD8 480 aaKnown RBP24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 CCDC87Q9NVE4 849 aa24.03■■□□□ 1.44
EXOSC3-202ENST00000396521 CABP4P57796 275 aa24.02■■□□□ 1.44
EXOSC3-202ENST00000396521 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
EXOSC3-202ENST00000396521 POLR3GLQ9BT43 218 aa24.01■■□□□ 1.43
EXOSC3-202ENST00000396521 MTHFSP49914 203 aa23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 EIF4G2P78344 907 aaKnown RBP eCLIP23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 C1orf141Q5JVX7 400 aa23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 ZNF530Q6P9A1 599 aaPredicted RBP23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 SLC4A9Q96Q91 983 aa23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 PARP3Q9Y6F1 533 aa23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 ZNF831Q5JPB2 1677 aa23.99■■□□□ 1.43
EXOSC3-202ENST00000396521 GYS1P13807 737 aa23.98■■□□□ 1.43
EXOSC3-202ENST00000396521 WWC3Q9ULE0 1092 aa23.98■■□□□ 1.43
EXOSC3-202ENST00000396521 BCS1LQ9Y276 419 aa23.98■■□□□ 1.43
EXOSC3-202ENST00000396521 PXDNLA1KZ92 1463 aa23.98■■□□□ 1.43
EXOSC3-202ENST00000396521 KIF3CO14782 793 aa23.97■■□□□ 1.43
EXOSC3-202ENST00000396521 CICQ96RK0 1608 aaPredicted RBP23.97■■□□□ 1.43
EXOSC3-202ENST00000396521 PANK3Q9H999 370 aa23.97■■□□□ 1.43
EXOSC3-202ENST00000396521 C10orf71Q711Q0 1435 aa23.96■■□□□ 1.43
EXOSC3-202ENST00000396521 A0A0G2JLW4 131 aa23.96■■□□□ 1.43
EXOSC3-202ENST00000396521 TOMM70O94826 608 aa23.95■■□□□ 1.42
EXOSC3-202ENST00000396521 ARHGAP27Q6ZUM4 889 aa23.94■■□□□ 1.42
EXOSC3-202ENST00000396521 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
EXOSC3-202ENST00000396521 FCHSD2O94868 740 aa23.93■■□□□ 1.42
EXOSC3-202ENST00000396521 APLP1P51693 650 aa23.93■■□□□ 1.42
EXOSC3-202ENST00000396521 DPEP1P16444 411 aa23.92■■□□□ 1.42
EXOSC3-202ENST00000396521 NFATC2IPQ8NCF5 419 aa23.92■■□□□ 1.42
EXOSC3-202ENST00000396521 KDM6AO15550 1401 aaPredicted RBP23.92■■□□□ 1.42
EXOSC3-202ENST00000396521 PTCD1O75127 700 aaKnown RBP23.91■■□□□ 1.42
EXOSC3-202ENST00000396521 PIM2Q9P1W9 311 aa23.91■■□□□ 1.42
EXOSC3-202ENST00000396521 KIF13BQ9NQT8 1826 aa23.91■■□□□ 1.42
EXOSC3-202ENST00000396521 CRKLP46109 303 aaKnown RBP23.9■■□□□ 1.42
EXOSC3-202ENST00000396521 KNSTRNQ9Y448 316 aa23.9■■□□□ 1.42
EXOSC3-202ENST00000396521 SULT6B1Q6IMI4 303 aa23.88■■□□□ 1.41
EXOSC3-202ENST00000396521 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
EXOSC3-202ENST00000396521 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
EXOSC3-202ENST00000396521 DALRD3Q5D0E6 543 aaKnown RBP23.87■■□□□ 1.41
EXOSC3-202ENST00000396521 KCNA3P22001 575 aa23.86■■□□□ 1.41
EXOSC3-202ENST00000396521 AKAP4Q5JQC9 854 aa23.86■■□□□ 1.41
EXOSC3-202ENST00000396521 AEBP1Q8IUX7 1158 aa23.86■■□□□ 1.41
EXOSC3-202ENST00000396521 C4AP0C0L4 1744 aa23.86■■□□□ 1.41
EXOSC3-202ENST00000396521 ZPR1O75312 459 aa23.84■■□□□ 1.41
EXOSC3-202ENST00000396521 IL13P35225 146 aa23.84■■□□□ 1.41
EXOSC3-202ENST00000396521 COL5A3P25940 1745 aaPredicted RBP23.84■■□□□ 1.41
EXOSC3-202ENST00000396521 FKBP8Q14318 412 aa23.83■■□□□ 1.41
EXOSC3-202ENST00000396521 C9orf131Q5VYM1 1079 aa23.83■■□□□ 1.41
EXOSC3-202ENST00000396521 C16orf71Q8IYS4 520 aaPredicted RBP23.83■■□□□ 1.41
EXOSC3-202ENST00000396521 RBM46Q8TBY0 533 aaKnown RBP23.83■■□□□ 1.41
EXOSC3-202ENST00000396521 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
EXOSC3-202ENST00000396521 KDM2BQ8NHM5 1336 aa23.83■■□□□ 1.4
EXOSC3-202ENST00000396521 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
EXOSC3-202ENST00000396521 KIAA1551Q9HCM1 1747 aa23.81■■□□□ 1.4
EXOSC3-202ENST00000396521 TM4SF1P30408 202 aa23.81■■□□□ 1.4
EXOSC3-202ENST00000396521 SLC52A2Q9HAB3 445 aa23.81■■□□□ 1.4
EXOSC3-202ENST00000396521 SRP68Q9UHB9 627 aaKnown RBP23.81■■□□□ 1.4
EXOSC3-202ENST00000396521 DDR1Q08345 913 aa23.8■■□□□ 1.4
EXOSC3-202ENST00000396521 FSTL1Q12841 308 aa23.8■■□□□ 1.4
EXOSC3-202ENST00000396521 NMRK2Q9NPI5 230 aa23.8■■□□□ 1.4
EXOSC3-202ENST00000396521 N4BP2Q86UW6 1770 aaPredicted RBP23.79■■□□□ 1.4
EXOSC3-202ENST00000396521 POLRMTO00411 1230 aaKnown RBP23.78■■□□□ 1.4
EXOSC3-202ENST00000396521 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
EXOSC3-202ENST00000396521 DNAJC5GQ8N7S2 189 aa23.78■■□□□ 1.4
EXOSC3-202ENST00000396521 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
EXOSC3-202ENST00000396521 MYH14Q7Z406 1995 aaKnown RBP23.78■■□□□ 1.4
EXOSC3-202ENST00000396521 CYP19A1P11511 503 aaPredicted RBP23.76■■□□□ 1.39
EXOSC3-202ENST00000396521 DNAJC10Q8IXB1 793 aa23.76■■□□□ 1.39
EXOSC3-202ENST00000396521 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
EXOSC3-202ENST00000396521 NARFQ9UHQ1 456 aa23.76■■□□□ 1.39
EXOSC3-202ENST00000396521 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
EXOSC3-202ENST00000396521 AMER1Q5JTC6 1135 aaPredicted RBP23.75■■□□□ 1.39
EXOSC3-202ENST00000396521 RNMTO43148 476 aaKnown RBP23.74■■□□□ 1.39
EXOSC3-202ENST00000396521 USPL1Q5W0Q7 1092 aa23.74■■□□□ 1.39
EXOSC3-202ENST00000396521 CHRNA5P30532 468 aa23.73■■□□□ 1.39
EXOSC3-202ENST00000396521 LGR6Q9HBX8 967 aa23.73■■□□□ 1.39
EXOSC3-202ENST00000396521 ARFGEF1Q9Y6D6 1849 aa23.72■■□□□ 1.39
EXOSC3-202ENST00000396521 BRCA1P38398 1863 aaKnown RBP23.72■■□□□ 1.39
EXOSC3-202ENST00000396521 STARD3NLO95772 234 aa23.71■■□□□ 1.39
EXOSC3-202ENST00000396521 NFIXQ14938 502 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms