RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ATRNO75882 1429 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 ARHGEF10O15013 1369 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 GOLGA8CPA6NN73 597 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 CLCN1P35523 988 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 POGKQ9P215 609 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
PTPN20-208ENST00000395727 SLIT2O94813 1529 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 BCL9LQ86UU0 1499 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 NWD2Q9ULI1 1742 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 CRYBG1Q9Y4K1 1723 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 RGS12O14924 1447 aa8.88□□□□□ -0.99
PTPN20-208ENST00000395727 TRPM1Q7Z4N2 1603 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 SOWAHBA6NEL2 793 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 WASLO00401 505 aaPredicted RBP8.87□□□□□ -0.99
PTPN20-208ENST00000395727 RXRBP28702 533 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 RBM6P78332 1123 aaKnown RBP8.87□□□□□ -0.99
PTPN20-208ENST00000395727 PARP9Q8IXQ6 854 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 WNT2BQ93097 391 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 GPCPD1Q9NPB8 672 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 TRAK1Q9UPV9 953 aa8.87□□□□□ -0.99
PTPN20-208ENST00000395727 PSME1Q06323 249 aa8.86□□□□□ -0.99
PTPN20-208ENST00000395727 KRT28Q7Z3Y7 464 aa8.86□□□□□ -0.99
PTPN20-208ENST00000395727 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
PTPN20-208ENST00000395727 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
PTPN20-208ENST00000395727 PRR36Q9H6K5 1346 aa8.85□□□□□ -0.99
PTPN20-208ENST00000395727 PLCH1Q4KWH8 1693 aa8.85□□□□□ -0.99
PTPN20-208ENST00000395727 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
PTPN20-208ENST00000395727 KCTD12Q96CX2 325 aaKnown RBP8.85□□□□□ -0.99
PTPN20-208ENST00000395727 NGLY1Q96IV0 654 aa8.85□□□□□ -0.99
PTPN20-208ENST00000395727 POLR3AO14802 1390 aaPredicted RBP8.85□□□□□ -0.99
PTPN20-208ENST00000395727 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 BCAMP50895 628 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 MMRN1Q13201 1228 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 SAFB2Q14151 953 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPN20-208ENST00000395727 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
PTPN20-208ENST00000395727 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
PTPN20-208ENST00000395727 USP21Q9UK80 565 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
PTPN20-208ENST00000395727 QRICH2Q9H0J4 1663 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
PTPN20-208ENST00000395727 NRAPQ86VF7 1730 aa8.83□□□□□ -1
PTPN20-208ENST00000395727 GLI3P10071 1580 aa8.83□□□□□ -1
PTPN20-208ENST00000395727 XPCQ01831 940 aaPredicted RBP8.83□□□□□ -1
PTPN20-208ENST00000395727 GIGYF2Q6Y7W6 1299 aaKnown RBP8.83□□□□□ -1
PTPN20-208ENST00000395727 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
PTPN20-208ENST00000395727 COL14A1Q05707 1796 aaKnown RBP8.83□□□□□ -1
PTPN20-208ENST00000395727 BRD4O60885 1362 aaPredicted RBP8.83□□□□□ -1
PTPN20-208ENST00000395727 SLC10A3P09131 477 aa8.82□□□□□ -1
PTPN20-208ENST00000395727 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
PTPN20-208ENST00000395727 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
PTPN20-208ENST00000395727 PHRF1Q9P1Y6 1649 aaKnown RBP8.82□□□□□ -1
PTPN20-208ENST00000395727 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
PTPN20-208ENST00000395727 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
PTPN20-208ENST00000395727 NBPF1Q3BBV0 1214 aa8.81□□□□□ -1
PTPN20-208ENST00000395727 SULF1Q8IWU6 871 aa8.81□□□□□ -1
PTPN20-208ENST00000395727 L3MBTL2Q969R5 705 aa8.81□□□□□ -1
PTPN20-208ENST00000395727 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
PTPN20-208ENST00000395727 SBNO2Q9Y2G9 1366 aa8.81□□□□□ -1
PTPN20-208ENST00000395727 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 CD46P15529 392 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 SLC4A3P48751 1232 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 UNC5CLQ8IV45 518 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
PTPN20-208ENST00000395727 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
PTPN20-208ENST00000395727 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 ATAD2Q6PL18 1390 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 RALGAPBQ86X10 1494 aa8.8□□□□□ -1
PTPN20-208ENST00000395727 NRKQ7Z2Y5 1582 aa8.79□□□□□ -1
PTPN20-208ENST00000395727 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
PTPN20-208ENST00000395727 MS4A1P11836 297 aa8.79□□□□□ -1
PTPN20-208ENST00000395727 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
PTPN20-208ENST00000395727 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
PTPN20-208ENST00000395727 CDK19Q9BWU1 502 aa8.79□□□□□ -1
PTPN20-208ENST00000395727 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
PTPN20-208ENST00000395727 RNF40O75150 1001 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 NEUROD2Q15784 382 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 VPS72Q15906 364 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
PTPN20-208ENST00000395727 NECTIN2Q92692 538 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 WBP1LQ9NX94 342 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 PPIP5K1Q6PFW1 1433 aa8.78□□□□□ -1
PTPN20-208ENST00000395727 ROCK2O75116 1388 aaKnown RBP8.77□□□□□ -1.01
PTPN20-208ENST00000395727 PPP4CP60510 307 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 LMO7Q8WWI1 1683 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 SSH2Q76I76 1423 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 USP19O94966 1318 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 ACEP12821 1306 aa8.77□□□□□ -1.01
PTPN20-208ENST00000395727 CPDO75976 1380 aa8.76□□□□□ -1.01
PTPN20-208ENST00000395727 SLIT3O75094 1523 aa8.76□□□□□ -1.01
PTPN20-208ENST00000395727 THSD7AQ9UPZ6 1657 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms