RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 C10orf71Q711Q0 1435 aa18.86■□□□□ 0.61
CHCHD2-201ENST00000395422 TGFB2P61812 414 aa18.86■□□□□ 0.61
CHCHD2-201ENST00000395422 TMF1P82094 1093 aa18.86■□□□□ 0.61
CHCHD2-201ENST00000395422 SLC4A9Q96Q91 983 aa18.86■□□□□ 0.61
CHCHD2-201ENST00000395422 EYA1Q99502 592 aa18.86■□□□□ 0.61
CHCHD2-201ENST00000395422 PHKG2P15735 406 aa18.85■□□□□ 0.61
CHCHD2-201ENST00000395422 KDRP35968 1356 aa18.84■□□□□ 0.61
CHCHD2-201ENST00000395422 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
CHCHD2-201ENST00000395422 DPEP1P16444 411 aa18.84■□□□□ 0.61
CHCHD2-201ENST00000395422 HTRA3P83110 453 aa18.84■□□□□ 0.61
CHCHD2-201ENST00000395422 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
CHCHD2-201ENST00000395422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.6
CHCHD2-201ENST00000395422 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
CHCHD2-201ENST00000395422 TRAPPC3LQ5T215 181 aa18.82■□□□□ 0.6
CHCHD2-201ENST00000395422 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
CHCHD2-201ENST00000395422 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
CHCHD2-201ENST00000395422 RTCBQ9Y3I0 505 aaKnown RBP18.82■□□□□ 0.6
CHCHD2-201ENST00000395422 FCHSD2O94868 740 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 GYS1P13807 737 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 KCNA3P22001 575 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 NLGN1Q8N2Q7 840 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
CHCHD2-201ENST00000395422 C9orf131Q5VYM1 1079 aa18.8■□□□□ 0.6
CHCHD2-201ENST00000395422 N4BP2Q86UW6 1770 aaPredicted RBP18.8■□□□□ 0.6
CHCHD2-201ENST00000395422 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
CHCHD2-201ENST00000395422 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
CHCHD2-201ENST00000395422 COL13A1Q5TAT6 717 aaPredicted RBP18.78■□□□□ 0.6
CHCHD2-201ENST00000395422 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
CHCHD2-201ENST00000395422 RC3H1Q5TC82 1133 aaKnown RBP18.77■□□□□ 0.6
CHCHD2-201ENST00000395422 KLRG1Q96E93 195 aa18.77■□□□□ 0.6
CHCHD2-201ENST00000395422 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
CHCHD2-201ENST00000395422 PCNTO95613 3336 aa18.77■□□□□ 0.59
CHCHD2-201ENST00000395422 CNTNAP4Q9C0A0 1308 aa18.76■□□□□ 0.59
CHCHD2-201ENST00000395422 ADRA2BP18089 450 aa18.76■□□□□ 0.59
CHCHD2-201ENST00000395422 PARP3Q9Y6F1 533 aa18.76■□□□□ 0.59
CHCHD2-201ENST00000395422 ANKRD26Q9UPS8 1709 aa18.76■□□□□ 0.59
CHCHD2-201ENST00000395422 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
CHCHD2-201ENST00000395422 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
CHCHD2-201ENST00000395422 RFC4P35249 363 aa18.75■□□□□ 0.59
CHCHD2-201ENST00000395422 EIF4A2Q14240 407 aaKnown RBP18.75■□□□□ 0.59
CHCHD2-201ENST00000395422 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
CHCHD2-201ENST00000395422 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
CHCHD2-201ENST00000395422 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
CHCHD2-201ENST00000395422 DCAF5Q96JK2 942 aa18.74■□□□□ 0.59
CHCHD2-201ENST00000395422 WDR90Q96KV7 1748 aa18.74■□□□□ 0.59
CHCHD2-201ENST00000395422 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
CHCHD2-201ENST00000395422 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
CHCHD2-201ENST00000395422 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
CHCHD2-201ENST00000395422 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
CHCHD2-201ENST00000395422 DDR1Q08345 913 aa18.72■□□□□ 0.59
CHCHD2-201ENST00000395422 FSTL1Q12841 308 aa18.72■□□□□ 0.59
CHCHD2-201ENST00000395422 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
CHCHD2-201ENST00000395422 PIM2Q9P1W9 311 aa18.72■□□□□ 0.59
CHCHD2-201ENST00000395422 FKBP8Q14318 412 aa18.71■□□□□ 0.59
CHCHD2-201ENST00000395422 DALRD3Q5D0E6 543 aaKnown RBP18.71■□□□□ 0.59
CHCHD2-201ENST00000395422 RRAGCQ9HB90 399 aa18.71■□□□□ 0.59
CHCHD2-201ENST00000395422 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
CHCHD2-201ENST00000395422 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
CHCHD2-201ENST00000395422 CHRNA5P30532 468 aa18.7■□□□□ 0.58
CHCHD2-201ENST00000395422 COL5A3P25940 1745 aaPredicted RBP18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 CAPN15O75808 1086 aa18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 CRKLP46109 303 aaKnown RBP18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
CHCHD2-201ENST00000395422 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
CHCHD2-201ENST00000395422 CABP4P57796 275 aa18.68■□□□□ 0.58
CHCHD2-201ENST00000395422 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
CHCHD2-201ENST00000395422 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
CHCHD2-201ENST00000395422 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
CHCHD2-201ENST00000395422 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
CHCHD2-201ENST00000395422 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
CHCHD2-201ENST00000395422 PRELPP51888 382 aa18.65■□□□□ 0.58
CHCHD2-201ENST00000395422 RASSF7Q02833 373 aa18.65■□□□□ 0.58
CHCHD2-201ENST00000395422 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
CHCHD2-201ENST00000395422 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
CHCHD2-201ENST00000395422 TM4SF1P30408 202 aa18.64■□□□□ 0.57
CHCHD2-201ENST00000395422 INTS5Q6P9B9 1019 aaKnown RBP18.64■□□□□ 0.57
CHCHD2-201ENST00000395422 AEBP1Q8IUX7 1158 aa18.64■□□□□ 0.57
CHCHD2-201ENST00000395422 TNS4Q8IZW8 715 aa18.64■□□□□ 0.57
CHCHD2-201ENST00000395422 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.57
CHCHD2-201ENST00000395422 MTHFSP49914 203 aa18.63■□□□□ 0.57
CHCHD2-201ENST00000395422 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
CHCHD2-201ENST00000395422 AMOTQ4VCS5 1084 aa18.61■□□□□ 0.57
CHCHD2-201ENST00000395422 USPL1Q5W0Q7 1092 aa18.6■□□□□ 0.57
CHCHD2-201ENST00000395422 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CHCHD2-201ENST00000395422 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
CHCHD2-201ENST00000395422 TJP1Q07157 1748 aa18.59■□□□□ 0.57
CHCHD2-201ENST00000395422 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.57
CHCHD2-201ENST00000395422 TNRC6CQ9HCJ0 1690 aaKnown RBP18.58■□□□□ 0.57
CHCHD2-201ENST00000395422 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
CHCHD2-201ENST00000395422 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
CHCHD2-201ENST00000395422 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
CHCHD2-201ENST00000395422 ZC3H4Q9UPT8 1303 aaKnown RBP18.57■□□□□ 0.56
CHCHD2-201ENST00000395422 GLTPD2A6NH11 291 aa18.57■□□□□ 0.56
CHCHD2-201ENST00000395422 NFIXQ14938 502 aa18.57■□□□□ 0.56
CHCHD2-201ENST00000395422 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
CHCHD2-201ENST00000395422 LMNB1P20700 586 aa18.56■□□□□ 0.56
CHCHD2-201ENST00000395422 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms