RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 KDM4FA0A1W2PPD8 638 aa26.38■■□□□ 1.81
RAP1B-204ENST00000393436 CCT4P50991 539 aaKnown RBP26.38■■□□□ 1.81
RAP1B-204ENST00000393436 CEP85Q6P2H3 762 aa26.38■■□□□ 1.81
RAP1B-204ENST00000393436 CRYBG1Q9Y4K1 1723 aa26.37■■□□□ 1.81
RAP1B-204ENST00000393436 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
RAP1B-204ENST00000393436 MYT1Q01538 1121 aa26.36■■□□□ 1.81
RAP1B-204ENST00000393436 FKBP5Q13451 457 aaPredicted RBP26.36■■□□□ 1.81
RAP1B-204ENST00000393436 C1orf141Q5JVX7 400 aa26.36■■□□□ 1.81
RAP1B-204ENST00000393436 CABLES1Q8TDN4 633 aa26.36■■□□□ 1.81
RAP1B-204ENST00000393436 TEFQ10587 303 aa26.36■■□□□ 1.81
RAP1B-204ENST00000393436 RPAP2Q8IXW5 612 aaPredicted RBP26.36■■□□□ 1.81
RAP1B-204ENST00000393436 DCTPP1Q9H773 170 aa26.36■■□□□ 1.81
RAP1B-204ENST00000393436 RNMTO43148 476 aaKnown RBP26.35■■□□□ 1.81
RAP1B-204ENST00000393436 KCNQ3O43525 872 aa26.35■■□□□ 1.81
RAP1B-204ENST00000393436 HDGFL1Q5TGJ6 251 aa26.35■■□□□ 1.81
RAP1B-204ENST00000393436 UPF2Q9HAU5 1272 aaKnown RBP26.35■■□□□ 1.81
RAP1B-204ENST00000393436 N4BP2Q86UW6 1770 aaPredicted RBP26.35■■□□□ 1.81
RAP1B-204ENST00000393436 NBR1Q14596 966 aa26.33■■□□□ 1.81
RAP1B-204ENST00000393436 TBC1D32Q96NH3 1257 aa26.33■■□□□ 1.81
RAP1B-204ENST00000393436 BTBD11A6QL63 1104 aa26.32■■□□□ 1.8
RAP1B-204ENST00000393436 DAXXQ9UER7 740 aaPredicted RBP26.32■■□□□ 1.8
RAP1B-204ENST00000393436 OVOS2A0A0G2JMS6 1433 aa26.32■■□□□ 1.8
RAP1B-204ENST00000393436 SPATA31A3Q5VYP0 1347 aa26.32■■□□□ 1.8
RAP1B-204ENST00000393436 SIPA1L3O60292 1781 aaPredicted RBP26.31■■□□□ 1.8
RAP1B-204ENST00000393436 ADAMTS7Q9UKP4 1686 aa26.3■■□□□ 1.8
RAP1B-204ENST00000393436 EIF2S2P20042 333 aaKnown RBP26.3■■□□□ 1.8
RAP1B-204ENST00000393436 BMP2KLQ5H9B9 411 aa26.3■■□□□ 1.8
RAP1B-204ENST00000393436 PHAXQ9H814 394 aaKnown RBP26.3■■□□□ 1.8
RAP1B-204ENST00000393436 NLRP2Q9NX02 1062 aa26.3■■□□□ 1.8
RAP1B-204ENST00000393436 BRINP3Q76B58 766 aa26.29■■□□□ 1.8
RAP1B-204ENST00000393436 HOXB7P09629 217 aa26.28■■□□□ 1.8
RAP1B-204ENST00000393436 MFAP1P55081 439 aaKnown RBP26.28■■□□□ 1.8
RAP1B-204ENST00000393436 CHRNA2Q15822 529 aa26.28■■□□□ 1.8
RAP1B-204ENST00000393436 PXDNLA1KZ92 1463 aa26.28■■□□□ 1.8
RAP1B-204ENST00000393436 ZNF335Q9H4Z2 1342 aaPredicted RBP26.26■■□□□ 1.8
RAP1B-204ENST00000393436 RAPGEF4Q8WZA2 1011 aa26.26■■□□□ 1.79
RAP1B-204ENST00000393436 ABCC6O95255 1503 aa26.25■■□□□ 1.79
RAP1B-204ENST00000393436 GNAI2P04899 355 aa26.25■■□□□ 1.79
RAP1B-204ENST00000393436 CHPF2Q9P2E5 772 aa26.25■■□□□ 1.79
RAP1B-204ENST00000393436 MEGF6O75095 1541 aa26.25■■□□□ 1.79
RAP1B-204ENST00000393436 CSB-PGBD3P0DP91 1061 aa26.24■■□□□ 1.79
RAP1B-204ENST00000393436 PLEKHM2Q8IWE5 1019 aa26.24■■□□□ 1.79
RAP1B-204ENST00000393436 SCN11AQ9UI33 1791 aa26.24■■□□□ 1.79
RAP1B-204ENST00000393436 C16orf71Q8IYS4 520 aaPredicted RBP26.23■■□□□ 1.79
RAP1B-204ENST00000393436 BCL11AQ9H165 835 aa26.23■■□□□ 1.79
RAP1B-204ENST00000393436 HMMRO75330 724 aa26.22■■□□□ 1.79
RAP1B-204ENST00000393436 C22orf23Q9BZE7 217 aa26.22■■□□□ 1.79
RAP1B-204ENST00000393436 GNAI3P08754 354 aa26.22■■□□□ 1.79
RAP1B-204ENST00000393436 TATP17735 454 aaPredicted RBP26.22■■□□□ 1.79
RAP1B-204ENST00000393436 CPDO75976 1380 aa26.21■■□□□ 1.79
RAP1B-204ENST00000393436 APBB1O00213 710 aa26.21■■□□□ 1.79
RAP1B-204ENST00000393436 SMARCA5O60264 1052 aaPredicted RBP26.21■■□□□ 1.79
RAP1B-204ENST00000393436 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.79
RAP1B-204ENST00000393436 ANXA1P04083 346 aa26.2■■□□□ 1.78
RAP1B-204ENST00000393436 KDM6AO15550 1401 aaPredicted RBP26.2■■□□□ 1.78
RAP1B-204ENST00000393436 OTUD7AQ8TE49 926 aaPredicted RBP26.19■■□□□ 1.78
RAP1B-204ENST00000393436 CHMP4AQ9BY43 222 aa26.19■■□□□ 1.78
RAP1B-204ENST00000393436 GSPT1P15170 499 aaKnown RBP26.19■■□□□ 1.78
RAP1B-204ENST00000393436 SLAIN2Q9P270 581 aa26.19■■□□□ 1.78
RAP1B-204ENST00000393436 GIGYF1O75420 1035 aaPredicted RBP26.18■■□□□ 1.78
RAP1B-204ENST00000393436 USP44Q9H0E7 712 aa26.18■■□□□ 1.78
RAP1B-204ENST00000393436 PHKG2P15735 406 aa26.17■■□□□ 1.78
RAP1B-204ENST00000393436 SPG7Q9UQ90 795 aa26.17■■□□□ 1.78
RAP1B-204ENST00000393436 PRAMEF22A3QJZ6 481 aa26.17■■□□□ 1.78
RAP1B-204ENST00000393436 BECN1Q14457 450 aa26.17■■□□□ 1.78
RAP1B-204ENST00000393436 LRRFIP2Q9Y608 721 aaKnown RBP26.17■■□□□ 1.78
RAP1B-204ENST00000393436 PKD1L3Q7Z443 1732 aa26.16■■□□□ 1.78
RAP1B-204ENST00000393436 SOS2Q07890 1332 aaPredicted RBP26.16■■□□□ 1.78
RAP1B-204ENST00000393436 PNMA6EA0A0J9YXQ4 647 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.15■■□□□ 1.78
RAP1B-204ENST00000393436 PI4KAP2A4QPH2 592 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 ATP8B2P98198 1209 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 TTC22Q5TAA0 569 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 TBC1D9Q6ZT07 1266 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 PI4KAP1Q8N8J0 262 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 SRCIN1Q9C0H9 1055 aa26.15■■□□□ 1.78
RAP1B-204ENST00000393436 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
RAP1B-204ENST00000393436 UBTFL1P0CB47 393 aaPredicted RBP26.14■■□□□ 1.77
RAP1B-204ENST00000393436 DNAAF4Q8WXU2 420 aa26.14■■□□□ 1.77
RAP1B-204ENST00000393436 SLC52A2Q9HAB3 445 aa26.14■■□□□ 1.77
RAP1B-204ENST00000393436 ADCY9O60503 1353 aa26.13■■□□□ 1.77
RAP1B-204ENST00000393436 IFNL2Q8IZJ0 200 aa26.13■■□□□ 1.77
RAP1B-204ENST00000393436 EXOC6BQ9Y2D4 811 aa26.13■■□□□ 1.77
RAP1B-204ENST00000393436 ABCA3Q99758 1704 aa26.13■■□□□ 1.77
RAP1B-204ENST00000393436 C5P01031 1676 aa26.13■■□□□ 1.77
RAP1B-204ENST00000393436 PROSER3Q2NL68 480 aa26.12■■□□□ 1.77
RAP1B-204ENST00000393436 SLC39A6Q13433 755 aa26.12■■□□□ 1.77
RAP1B-204ENST00000393436 BEND3Q5T5X7 828 aa26.12■■□□□ 1.77
RAP1B-204ENST00000393436 CDC45O75419 566 aa26.11■■□□□ 1.77
RAP1B-204ENST00000393436 TBC1D2Q9BYX2 928 aa26.11■■□□□ 1.77
RAP1B-204ENST00000393436 CYP27B1O15528 508 aa26.1■■□□□ 1.77
RAP1B-204ENST00000393436 NFATC2IPQ8NCF5 419 aa26.1■■□□□ 1.77
RAP1B-204ENST00000393436 PLEKHG2Q9H7P9 1386 aa26.1■■□□□ 1.77
RAP1B-204ENST00000393436 ZNF790Q6PG37 636 aa26.1■■□□□ 1.77
RAP1B-204ENST00000393436 PRDM11Q9NQV5 511 aa26.1■■□□□ 1.77
RAP1B-204ENST00000393436 RBM25P49756 843 aaKnown RBP26.09■■□□□ 1.77
RAP1B-204ENST00000393436 RTL5Q5HYW3 569 aaPredicted RBP26.09■■□□□ 1.77
RAP1B-204ENST00000393436 MRC1P22897 1456 aa26.08■■□□□ 1.77
RAP1B-204ENST00000393436 NBPF7P0C2Y1 421 aaPredicted RBP26.07■■□□□ 1.76
RAP1B-204ENST00000393436 IBTKQ9P2D0 1353 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms