RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 RPAP2Q8IXW5 612 aaPredicted RBP34.58■■■■□ 3.13
TPRA1-203ENST00000393400 ATP10DQ9P241 1426 aa34.58■■■■□ 3.13
TPRA1-203ENST00000393400 N4BP2Q86UW6 1770 aaPredicted RBP34.58■■■■□ 3.13
TPRA1-203ENST00000393400 RNMTO43148 476 aaKnown RBP34.58■■■■□ 3.13
TPRA1-203ENST00000393400 EIF4A1P60842 406 aaKnown RBP34.56■■■■□ 3.12
TPRA1-203ENST00000393400 TEFQ10587 303 aa34.56■■■■□ 3.12
TPRA1-203ENST00000393400 ANKRD44Q8N8A2 993 aa34.56■■■■□ 3.12
TPRA1-203ENST00000393400 PXDNLA1KZ92 1463 aa34.56■■■■□ 3.12
TPRA1-203ENST00000393400 FLIIQ13045 1269 aa34.55■■■■□ 3.12
TPRA1-203ENST00000393400 PLEKHG5O94827 1062 aa34.55■■■■□ 3.12
TPRA1-203ENST00000393400 SIPA1L3O60292 1781 aaPredicted RBP34.53■■■■□ 3.12
TPRA1-203ENST00000393400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.53■■■■□ 3.12
TPRA1-203ENST00000393400 DCTPP1Q9H773 170 aa34.52■■■■□ 3.12
TPRA1-203ENST00000393400 SOS2Q07890 1332 aaPredicted RBP34.51■■■■□ 3.11
TPRA1-203ENST00000393400 HDGFL1Q5TGJ6 251 aa34.51■■■■□ 3.11
TPRA1-203ENST00000393400 MPRIPQ6WCQ1 1025 aa34.51■■■■□ 3.11
TPRA1-203ENST00000393400 ZNF335Q9H4Z2 1342 aaPredicted RBP34.5■■■■□ 3.11
TPRA1-203ENST00000393400 BTBD11A6QL63 1104 aa34.49■■■■□ 3.11
TPRA1-203ENST00000393400 CEP85Q6P2H3 762 aa34.49■■■■□ 3.11
TPRA1-203ENST00000393400 RAPGEF4Q8WZA2 1011 aa34.49■■■■□ 3.11
TPRA1-203ENST00000393400 LNPKQ9C0E8 428 aa34.49■■■■□ 3.11
TPRA1-203ENST00000393400 ANKRD45Q5TZF3 282 aa34.48■■■■□ 3.11
TPRA1-203ENST00000393400 MEIS3Q99687 375 aa34.48■■■■□ 3.11
TPRA1-203ENST00000393400 SLAIN2Q9P270 581 aa34.48■■■■□ 3.11
TPRA1-203ENST00000393400 HEG1Q9ULI3 1381 aa34.46■■■■□ 3.11
TPRA1-203ENST00000393400 F6X3S4 739 aa34.46■■■■□ 3.11
TPRA1-203ENST00000393400 FKBP5Q13451 457 aaPredicted RBP34.46■■■■□ 3.11
TPRA1-203ENST00000393400 NLRP2Q9NX02 1062 aa34.46■■■■□ 3.11
TPRA1-203ENST00000393400 SEC24BO95487 1268 aa34.46■■■■□ 3.11
TPRA1-203ENST00000393400 CABLES1Q8TDN4 633 aa34.46■■■■□ 3.11
TPRA1-203ENST00000393400 TATP17735 454 aaPredicted RBP34.45■■■■□ 3.11
TPRA1-203ENST00000393400 UPF2Q9HAU5 1272 aaKnown RBP34.44■■■■□ 3.1
TPRA1-203ENST00000393400 SLC4A10Q6U841 1118 aa34.44■■■■□ 3.1
TPRA1-203ENST00000393400 SPG7Q9UQ90 795 aa34.43■■■■□ 3.1
TPRA1-203ENST00000393400 SCN11AQ9UI33 1791 aa34.43■■■■□ 3.1
TPRA1-203ENST00000393400 BMP2KLQ5H9B9 411 aa34.42■■■■□ 3.1
TPRA1-203ENST00000393400 PKD1L3Q7Z443 1732 aa34.42■■■■□ 3.1
TPRA1-203ENST00000393400 MEGF6O75095 1541 aa34.41■■■■□ 3.1
TPRA1-203ENST00000393400 GNAI3P08754 354 aa34.41■■■■□ 3.1
TPRA1-203ENST00000393400 HMMRO75330 724 aa34.4■■■■□ 3.1
TPRA1-203ENST00000393400 NECTIN2Q92692 538 aa34.4■■■■□ 3.1
TPRA1-203ENST00000393400 KCNQ3O43525 872 aa34.39■■■■□ 3.1
TPRA1-203ENST00000393400 CSB-PGBD3P0DP91 1061 aa34.39■■■■□ 3.1
TPRA1-203ENST00000393400 GNAI2P04899 355 aa34.38■■■■□ 3.09
TPRA1-203ENST00000393400 NHSL1Q5SYE7 1610 aa34.37■■■■□ 3.09
TPRA1-203ENST00000393400 PHKG2P15735 406 aa34.37■■■■□ 3.09
TPRA1-203ENST00000393400 CHRNA2Q15822 529 aa34.37■■■■□ 3.09
TPRA1-203ENST00000393400 TBC1D32Q96NH3 1257 aa34.37■■■■□ 3.09
TPRA1-203ENST00000393400 KDM6AO15550 1401 aaPredicted RBP34.36■■■■□ 3.09
TPRA1-203ENST00000393400 MRC1P22897 1456 aa34.35■■■■□ 3.09
TPRA1-203ENST00000393400 GIGYF1O75420 1035 aaPredicted RBP34.34■■■■□ 3.09
TPRA1-203ENST00000393400 IFNL2Q8IZJ0 200 aa34.34■■■■□ 3.09
TPRA1-203ENST00000393400 ABCA3Q99758 1704 aa34.34■■■■□ 3.09
TPRA1-203ENST00000393400 EIF2S2P20042 333 aaKnown RBP34.33■■■■□ 3.09
TPRA1-203ENST00000393400 PHAXQ9H814 394 aaKnown RBP34.32■■■■□ 3.09
TPRA1-203ENST00000393400 CHPF2Q9P2E5 772 aa34.32■■■■□ 3.09
TPRA1-203ENST00000393400 DBF4Q9UBU7 674 aaPredicted RBP34.32■■■■□ 3.09
TPRA1-203ENST00000393400 SLC52A2Q9HAB3 445 aa34.32■■■■□ 3.08
TPRA1-203ENST00000393400 MYT1Q01538 1121 aa34.31■■■■□ 3.08
TPRA1-203ENST00000393400 HSP90AB1P08238 724 aaKnown RBP34.3■■■■□ 3.08
TPRA1-203ENST00000393400 PARP4Q9UKK3 1724 aaKnown RBP34.29■■■■□ 3.08
TPRA1-203ENST00000393400 WDR17Q8IZU2 1322 aa34.29■■■■□ 3.08
TPRA1-203ENST00000393400 DCAF5Q96JK2 942 aa34.28■■■■□ 3.08
TPRA1-203ENST00000393400 PRDM11Q9NQV5 511 aa34.27■■■■□ 3.08
TPRA1-203ENST00000393400 DAXXQ9UER7 740 aaPredicted RBP34.27■■■■□ 3.08
TPRA1-203ENST00000393400 PLEKHM2Q8IWE5 1019 aa34.27■■■■□ 3.08
TPRA1-203ENST00000393400 USP44Q9H0E7 712 aa34.27■■■■□ 3.08
TPRA1-203ENST00000393400 COL5A2P05997 1499 aaPredicted RBP34.26■■■■□ 3.07
TPRA1-203ENST00000393400 ATP8B2P98198 1209 aa34.25■■■■□ 3.07
TPRA1-203ENST00000393400 SRCIN1Q9C0H9 1055 aa34.25■■■■□ 3.07
TPRA1-203ENST00000393400 ZNF790Q6PG37 636 aa34.25■■■■□ 3.07
TPRA1-203ENST00000393400 DNAAF4Q8WXU2 420 aa34.25■■■■□ 3.07
TPRA1-203ENST00000393400 CYP27B1O15528 508 aa34.23■■■■□ 3.07
TPRA1-203ENST00000393400 BEND3Q5T5X7 828 aa34.22■■■■□ 3.07
TPRA1-203ENST00000393400 HYPKQ9NX55 129 aa34.22■■■■□ 3.07
TPRA1-203ENST00000393400 UBTFL1P0CB47 393 aaPredicted RBP34.21■■■■□ 3.07
TPRA1-203ENST00000393400 ADCY9O60503 1353 aa34.21■■■■□ 3.07
TPRA1-203ENST00000393400 EIF5BO60841 1220 aaKnown RBP34.2■■■■□ 3.07
TPRA1-203ENST00000393400 PI4KAP2A4QPH2 592 aa34.19■■■■□ 3.06
TPRA1-203ENST00000393400 BECN1Q14457 450 aa34.19■■■■□ 3.06
TPRA1-203ENST00000393400 PI4KAP1Q8N8J0 262 aa34.19■■■■□ 3.06
TPRA1-203ENST00000393400 C22orf23Q9BZE7 217 aa34.19■■■■□ 3.06
TPRA1-203ENST00000393400 DDX21Q9NR30 783 aaKnown RBP eCLIP34.18■■■■□ 3.06
TPRA1-203ENST00000393400 TTC22Q5TAA0 569 aa34.18■■■■□ 3.06
TPRA1-203ENST00000393400 LRRFIP2Q9Y608 721 aaKnown RBP34.18■■■■□ 3.06
TPRA1-203ENST00000393400 MFAP1P55081 439 aaKnown RBP34.17■■■■□ 3.06
TPRA1-203ENST00000393400 NFATC2IPQ8NCF5 419 aa34.17■■■■□ 3.06
TPRA1-203ENST00000393400 IBTKQ9P2D0 1353 aaPredicted RBP34.17■■■■□ 3.06
TPRA1-203ENST00000393400 CARD10Q9BWT7 1032 aa34.16■■■■□ 3.06
TPRA1-203ENST00000393400 ALDH1L1O75891 902 aa34.16■■■■□ 3.06
TPRA1-203ENST00000393400 KSR2Q6VAB6 950 aa34.16■■■■□ 3.06
TPRA1-203ENST00000393400 C5P01031 1676 aa34.15■■■■□ 3.06
TPRA1-203ENST00000393400 PCDH11XQ9BZA7 1347 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 PCDH11YQ9BZA8 1340 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 GSPT1P15170 499 aaKnown RBP34.14■■■■□ 3.06
TPRA1-203ENST00000393400 TOM1L2Q6ZVM7 507 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 OSBPL3Q9H4L5 887 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 CDC45O75419 566 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 SSH3Q8TE77 659 aa34.14■■■■□ 3.06
TPRA1-203ENST00000393400 PNMA6EA0A0J9YXQ4 647 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms