RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 SMC2O95347 1197 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 FBXO31Q5XUX0 539 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 NEK4P51957 841 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 CCDC171Q6TFL3 1326 aa8.99□□□□□ -0.97
VTI1A-201ENST00000393077 FAM43BQ6ZT52 329 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 RBM42Q9BTD8 480 aaKnown RBP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-201ENST00000393077 ADGRF5Q8IZF2 1346 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 NOC3LQ8WTT2 800 aaKnown RBP8.98□□□□□ -0.97
VTI1A-201ENST00000393077 CCDC34Q96HJ3 373 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 TULP2O00295 520 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 ATP2B1P20020 1258 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 KIAA1524Q8TCG1 905 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 ARFGAP3Q9NP61 516 aa8.98□□□□□ -0.97
VTI1A-201ENST00000393077 CASTP20810 708 aaKnown RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 MAGEA9P43362 315 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 INTS3Q68E01 1043 aaKnown RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 EGFL6Q8IUX8 553 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 GGNBP2Q9H3C7 697 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 ERLIN1O75477 346 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 ERCC4Q92889 916 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 URI1O94763 535 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 OAS2P29728 719 aaKnown RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 IDI1Q13907 227 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 PRAM1Q96QH2 718 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 PYCARDQ9ULZ3 195 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 WDR7Q9Y4E6 1490 aa8.97□□□□□ -0.97
VTI1A-201ENST00000393077 DHX29Q7Z478 1369 aaKnown RBP8.97□□□□□ -0.97
VTI1A-201ENST00000393077 ABCC2Q92887 1545 aa8.96□□□□□ -0.97
VTI1A-201ENST00000393077 WDR33Q9C0J8 1336 aaKnown RBP8.96□□□□□ -0.97
VTI1A-201ENST00000393077 A0A1B0GUA9 196 aa8.96□□□□□ -0.97
VTI1A-201ENST00000393077 NAA30Q147X3 362 aaPredicted RBP8.96□□□□□ -0.97
VTI1A-201ENST00000393077 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.97
VTI1A-201ENST00000393077 PCDHB15Q9Y5E8 787 aa8.96□□□□□ -0.97
VTI1A-201ENST00000393077 NBPF20Q3BBV1 942 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 MMS22LQ6ZRQ5 1243 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 PIK3R5Q8WYR1 880 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 RAI14Q9P0K7 980 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 VPS18Q9P253 973 aa8.96□□□□□ -0.98
VTI1A-201ENST00000393077 SNW1Q13573 536 aaKnown RBP8.95□□□□□ -0.98
VTI1A-201ENST00000393077 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
VTI1A-201ENST00000393077 ST7Q9NRC1 585 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 CCP110O43303 1012 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 NEMFO60524 1076 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 MCM2P49736 904 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 ITSN2Q9NZM3 1697 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 FBXO38Q6PIJ6 1188 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 SPTLC3Q9NUV7 552 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 PZPP20742 1482 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 PPP1R12AO14974 1030 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-201ENST00000393077 ERLIN2O94905 339 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 FAM177A1Q8N128 213 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-201ENST00000393077 GPT2Q8TD30 523 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 STK31Q9BXU1 1019 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 PDRG1Q9NUG6 133 aa8.95□□□□□ -0.98
VTI1A-201ENST00000393077 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 PES1O00541 588 aaKnown RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 SETSIPP0DME0 302 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 DNAJC21Q5F1R6 531 aaKnown RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 GIMAP6Q6P9H5 292 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 KIAA1328Q86T90 577 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 SRLQ86TD4 932 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 ERC1Q8IUD2 1116 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 BICD2Q8TD16 824 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 SUDS3Q9H7L9 328 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 VEZTQ9HBM0 779 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 A0A0G2JS52 829 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 MCM6Q14566 821 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 MVPQ14764 893 aaKnown RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 KMT5BQ4FZB7 885 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 FBXO18Q8NFZ0 1043 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 IRAK4Q9NWZ3 460 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 CTIFO43310 598 aaKnown RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 ACTN2P35609 894 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 SMC1AQ14683 1233 aaKnown RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 NAA25Q14CX7 972 aa8.94□□□□□ -0.98
VTI1A-201ENST00000393077 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-201ENST00000393077 VPS37CA5D8V6 355 aaPredicted RBP8.93□□□□□ -0.98
VTI1A-201ENST00000393077 SKILP12757 684 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 GCKP35557 465 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 ERCC6LQ2NKX8 1250 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 CEP57Q86XR8 500 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 ANKRD18AQ8IVF6 992 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 TNMDQ9H2S6 317 aa8.93□□□□□ -0.98
VTI1A-201ENST00000393077 SPATS2LQ9NUQ6 558 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms