RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 C8orf37Q96NL8 207 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 C1QTNF2Q9BXJ5 285 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 TSPAN10Q9H1Z9 355 aaPredicted RBP2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 CYLDQ9NQC7 956 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 RNF19AQ9NV58 838 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 CCDC87Q9NVE4 849 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 PLA2G2EQ9NZK7 142 aa2.92□□□□□ -1.94
SNORA48.1-201ENST00000390879 TMEM229AB2RXF0 380 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 M0R2N6 131 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 ERVH48-1M5A8F1 160 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 FOXO3O43524 673 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 PPP1R12BO60237 982 aaPredicted RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 LDHBP07195 334 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 HMGB1P09429 215 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 CDK11BP21127 795 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 SCNN1DP51172 638 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 GDF10P55107 478 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 HDLBPQ00341 1268 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 XPCQ01831 940 aaPredicted RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 ARID5BQ14865 1188 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 C16orf46Q6P387 395 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 THSD4Q6ZMP0 1018 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 VASH1Q7L8A9 365 aaPredicted RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 SEPT12Q8IYM1 358 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 NKX2-3Q8TAU0 364 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 KCTD12Q96CX2 325 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 PUS7Q96PZ0 661 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 DUSP9Q99956 384 aaKnown RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 RBCK1Q9BYM8 510 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 MRS2Q9HD23 443 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 TMPRSS4Q9NRS4 437 aa2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 CDK11AQ9UQ88 783 aaPredicted RBP2.91□□□□□ -1.94
SNORA48.1-201ENST00000390879 ATAD2Q6PL18 1390 aa2.9□□□□□ -1.94
SNORA48.1-201ENST00000390879 A0A1W2PRU2 124 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 SCAMP3O14828 347 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 PPEF1O14829 653 aaPredicted RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 BACH1O14867 736 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 TREHO43280 583 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 SMARCA5O60264 1052 aaPredicted RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 FSHRP23945 695 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 EIF1AXP47813 144 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 PTPN5P54829 565 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 PLCB3Q01970 1234 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 FMR1Q06787 632 aaKnown RBP eCLIP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 MRPL58Q14197 206 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 COL19A1Q14993 1142 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 SF3A1Q15459 793 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 CC2D2BQ6DHV5 1058 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 ATCAYQ86WG3 371 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 SLC9A9Q8IVB4 645 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 TRMT44Q8IYL2 757 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 TMEM87AQ8NBN3 555 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 COL26A1Q96A83 441 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 NGLY1Q96IV0 654 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 SETDB2Q96T68 719 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 IRX2Q9BZI1 471 aaPredicted RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 OSBPL3Q9H4L5 887 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 IL21Q9HBE4 155 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 RAB6BQ9NRW1 208 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 VTI1BQ9UEU0 232 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 PARP2Q9UGN5 583 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 CDV3Q9UKY7 258 aaKnown RBP2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 WWC3Q9ULE0 1092 aa2.9□□□□□ -1.95
SNORA48.1-201ENST00000390879 TNFRSF10BO14763 440 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 GPR182O15218 404 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 FZD6O60353 706 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 INHAP05111 366 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 NPR3P17342 541 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 EPHA4P54764 986 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 ERVK-9P63128 1117 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 EHHADHQ08426 723 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 PSMD2Q13200 908 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 DSC3Q14574 896 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 TJAP1Q5JTD0 557 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 COX20Q5RI15 118 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 NT5DC4Q86YG4 428 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 CCDC125Q86Z20 511 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 ZNF784Q8NCA9 323 aaPredicted RBP2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 PIK3R5Q8WYR1 880 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 UBXN4Q92575 508 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 PRKD2Q9BZL6 878 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 ETNK1Q9HBU6 452 aa2.89□□□□□ -1.95
SNORA48.1-201ENST00000390879 PNMA6FA0A0J9YX94 578 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 ZBTB39O15060 712 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 ZBTB24O43167 697 aaPredicted RBP2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 SORBS3O60504 671 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 PRPF40AO75400 957 aaKnown RBP2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 SKOR1P84550 965 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 ATP2B2Q01814 1243 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 DNM1Q05193 864 aaKnown RBP2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 RAD51AP2Q09MP3 1159 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 TRIM32Q13049 653 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 FAM26DQ5JW98 314 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 LDLRAD1Q5T700 205 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 ALKBH2Q6NS38 261 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 DMRTB1Q96MA1 342 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 TANGO6Q9C0B7 1094 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 NIF3L1Q9GZT8 377 aa2.88□□□□□ -1.95
SNORA48.1-201ENST00000390879 CCSER2Q9H7U1 834 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms