RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 SIRT1Q96EB6 747 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
TRAV40-201ENST00000390467 USP17L5A8MUK1 530 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 NCOA4Q13772 614 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 TMEM214Q6NUQ4 689 aaKnown RBP7.56□□□□□ -1.2
TRAV40-201ENST00000390467 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 FNBP4Q8N3X1 1017 aaPredicted RBP7.56□□□□□ -1.2
TRAV40-201ENST00000390467 NFATC2IPQ8NCF5 419 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 WHAMMQ8TF30 809 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
TRAV40-201ENST00000390467 GPAMQ9HCL2 828 aa7.56□□□□□ -1.2
TRAV40-201ENST00000390467 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
TRAV40-201ENST00000390467 EML3Q32P44 896 aa7.55□□□□□ -1.2
TRAV40-201ENST00000390467 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 F11P03951 625 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 GTF2IP78347 998 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
TRAV40-201ENST00000390467 PROSER2Q86WR7 435 aaPredicted RBP7.54□□□□□ -1.2
TRAV40-201ENST00000390467 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
TRAV40-201ENST00000390467 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 RHBDD1Q8TEB9 315 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 SERTAD1Q9UHV2 236 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
TRAV40-201ENST00000390467 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
TRAV40-201ENST00000390467 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
TRAV40-201ENST00000390467 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
TRAV40-201ENST00000390467 GMCL1Q96IK5 515 aa7.53□□□□□ -1.2
TRAV40-201ENST00000390467 NUCKS1Q9H1E3 243 aaKnown RBP7.53□□□□□ -1.2
TRAV40-201ENST00000390467 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 ADAMTS2O95450 1211 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 MSX1P28360 303 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 SMTNP53814 917 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 USP17L2Q6R6M4 530 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 RUBCNLQ9H714 662 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
TRAV40-201ENST00000390467 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 NOD1Q9Y239 953 aa7.52□□□□□ -1.21
TRAV40-201ENST00000390467 H7C1W4 665 aa7.51□□□□□ -1.21
TRAV40-201ENST00000390467 ATP4AP20648 1035 aa7.51□□□□□ -1.21
TRAV40-201ENST00000390467 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
TRAV40-201ENST00000390467 UBAP2LQ14157 1087 aaKnown RBP7.51□□□□□ -1.21
TRAV40-201ENST00000390467 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
TRAV40-201ENST00000390467 GLMNQ92990 594 aa7.51□□□□□ -1.21
TRAV40-201ENST00000390467 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
TRAV40-201ENST00000390467 ATP9BO43861 1147 aa7.5□□□□□ -1.21
TRAV40-201ENST00000390467 SRSF11Q05519 484 aaKnown RBP7.5□□□□□ -1.21
TRAV40-201ENST00000390467 MTFR1Q15390 333 aa7.5□□□□□ -1.21
TRAV40-201ENST00000390467 PLEKHM2Q8IWE5 1019 aa7.5□□□□□ -1.21
TRAV40-201ENST00000390467 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAV40-201ENST00000390467 MBIPQ9NS73 344 aa7.5□□□□□ -1.21
TRAV40-201ENST00000390467 ZNF358Q9NW07 568 aa7.5□□□□□ -1.21
TRAV40-201ENST00000390467 A6NJY4 79 aa7.49□□□□□ -1.21
TRAV40-201ENST00000390467 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
TRAV40-201ENST00000390467 CLDN10P78369 228 aa7.49□□□□□ -1.21
TRAV40-201ENST00000390467 PSME1Q06323 249 aa7.49□□□□□ -1.21
TRAV40-201ENST00000390467 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
TRAV40-201ENST00000390467 IGF1RP08069 1367 aa7.48□□□□□ -1.21
TRAV40-201ENST00000390467 ARHGEF15O94989 841 aa7.48□□□□□ -1.21
TRAV40-201ENST00000390467 FOXR1Q6PIV2 292 aa7.48□□□□□ -1.21
TRAV40-201ENST00000390467 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
TRAV40-201ENST00000390467 A6NJR5 290 aa7.47□□□□□ -1.21
TRAV40-201ENST00000390467 EPHA4P54764 986 aa7.47□□□□□ -1.21
TRAV40-201ENST00000390467 TRERF1Q96PN7 1200 aa7.47□□□□□ -1.21
TRAV40-201ENST00000390467 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
TRAV40-201ENST00000390467 ADAMTS8Q9UP79 889 aa7.47□□□□□ -1.21
TRAV40-201ENST00000390467 CDK2AP1O14519 115 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 ZBTB7BO15156 539 aaPredicted RBP7.46□□□□□ -1.22
TRAV40-201ENST00000390467 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
TRAV40-201ENST00000390467 CSB-PGBD3P0DP91 1061 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 PGBD3Q8N328 593 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 CRISPLD1Q9H336 500 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 SCHIP1Q9P0W5 487 aaPredicted RBP7.46□□□□□ -1.22
TRAV40-201ENST00000390467 PARP3Q9Y6F1 533 aa7.46□□□□□ -1.22
TRAV40-201ENST00000390467 MX2P20592 715 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 GSK3AP49840 483 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 FOXK2Q01167 660 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 ZDHHC1Q8WTX9 485 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
TRAV40-201ENST00000390467 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
TRAV40-201ENST00000390467 BACH1O14867 736 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 LBRQ14739 615 aaKnown RBP7.44□□□□□ -1.22
TRAV40-201ENST00000390467 CCDC102BQ68D86 513 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 TNS4Q8IZW8 715 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 OGFOD1Q8N543 542 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 ACDQ96AP0 544 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
TRAV40-201ENST00000390467 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 NDFIP2Q9NV92 336 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
TRAV40-201ENST00000390467 MKRN1Q9UHC7 482 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms