RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SEC24BO95487 1268 aa22.84■■□□□ 1.25
ACTN4-202ENST00000390009 ZNF335Q9H4Z2 1342 aaPredicted RBP22.84■■□□□ 1.25
ACTN4-202ENST00000390009 ATP10DQ9P241 1426 aa22.84■■□□□ 1.25
ACTN4-202ENST00000390009 F6X3S4 739 aa22.84■■□□□ 1.25
ACTN4-202ENST00000390009 FLIIQ13045 1269 aa22.84■■□□□ 1.25
ACTN4-202ENST00000390009 OVOS2A0A0G2JMS6 1433 aa22.83■■□□□ 1.25
ACTN4-202ENST00000390009 ABCC6O95255 1503 aa22.82■■□□□ 1.24
ACTN4-202ENST00000390009 RNMTO43148 476 aaKnown RBP22.82■■□□□ 1.24
ACTN4-202ENST00000390009 CCT4P50991 539 aaKnown RBP22.82■■□□□ 1.24
ACTN4-202ENST00000390009 SLC4A10Q6U841 1118 aa22.82■■□□□ 1.24
ACTN4-202ENST00000390009 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
ACTN4-202ENST00000390009 ANKRD45Q5TZF3 282 aa22.82■■□□□ 1.24
ACTN4-202ENST00000390009 MEIS3Q99687 375 aa22.82■■□□□ 1.24
ACTN4-202ENST00000390009 N4BP2Q86UW6 1770 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-202ENST00000390009 HDGFL1Q5TGJ6 251 aa22.81■■□□□ 1.24
ACTN4-202ENST00000390009 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-202ENST00000390009 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
ACTN4-202ENST00000390009 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-202ENST00000390009 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
ACTN4-202ENST00000390009 ADAMTS7Q9UKP4 1686 aa22.8■■□□□ 1.24
ACTN4-202ENST00000390009 RPAP2Q8IXW5 612 aaPredicted RBP22.8■■□□□ 1.24
ACTN4-202ENST00000390009 ANKRD44Q8N8A2 993 aa22.8■■□□□ 1.24
ACTN4-202ENST00000390009 HOXB7P09629 217 aa22.79■■□□□ 1.24
ACTN4-202ENST00000390009 RAPGEF4Q8WZA2 1011 aa22.79■■□□□ 1.24
ACTN4-202ENST00000390009 KCNQ3O43525 872 aa22.78■■□□□ 1.24
ACTN4-202ENST00000390009 CHRNA2Q15822 529 aa22.78■■□□□ 1.24
ACTN4-202ENST00000390009 CEP85Q6P2H3 762 aa22.78■■□□□ 1.24
ACTN4-202ENST00000390009 CPDO75976 1380 aa22.78■■□□□ 1.24
ACTN4-202ENST00000390009 SLAIN2Q9P270 581 aa22.78■■□□□ 1.24
ACTN4-202ENST00000390009 DCTPP1Q9H773 170 aa22.77■■□□□ 1.24
ACTN4-202ENST00000390009 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
ACTN4-202ENST00000390009 SCN11AQ9UI33 1791 aa22.76■■□□□ 1.23
ACTN4-202ENST00000390009 PXDNLA1KZ92 1463 aa22.75■■□□□ 1.23
ACTN4-202ENST00000390009 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
ACTN4-202ENST00000390009 MEGF6O75095 1541 aa22.75■■□□□ 1.23
ACTN4-202ENST00000390009 TATP17735 454 aaPredicted RBP22.75■■□□□ 1.23
ACTN4-202ENST00000390009 CHMP4AQ9BY43 222 aa22.75■■□□□ 1.23
ACTN4-202ENST00000390009 UPF2Q9HAU5 1272 aaKnown RBP22.75■■□□□ 1.23
ACTN4-202ENST00000390009 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
ACTN4-202ENST00000390009 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
ACTN4-202ENST00000390009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.72■■□□□ 1.23
ACTN4-202ENST00000390009 SPG7Q9UQ90 795 aa22.72■■□□□ 1.23
ACTN4-202ENST00000390009 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
ACTN4-202ENST00000390009 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
ACTN4-202ENST00000390009 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
ACTN4-202ENST00000390009 BMP2KLQ5H9B9 411 aa22.7■■□□□ 1.23
ACTN4-202ENST00000390009 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
ACTN4-202ENST00000390009 GNAI2P04899 355 aa22.7■■□□□ 1.22
ACTN4-202ENST00000390009 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
ACTN4-202ENST00000390009 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
ACTN4-202ENST00000390009 HMMRO75330 724 aa22.69■■□□□ 1.22
ACTN4-202ENST00000390009 GNAI3P08754 354 aa22.69■■□□□ 1.22
ACTN4-202ENST00000390009 PHKG2P15735 406 aa22.69■■□□□ 1.22
ACTN4-202ENST00000390009 TBC1D32Q96NH3 1257 aa22.69■■□□□ 1.22
ACTN4-202ENST00000390009 GIGYF1O75420 1035 aaPredicted RBP22.68■■□□□ 1.22
ACTN4-202ENST00000390009 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
ACTN4-202ENST00000390009 SLC4A3P48751 1232 aa22.67■■□□□ 1.22
ACTN4-202ENST00000390009 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
ACTN4-202ENST00000390009 PRDM11Q9NQV5 511 aa22.67■■□□□ 1.22
ACTN4-202ENST00000390009 NHSL1Q5SYE7 1610 aa22.67■■□□□ 1.22
ACTN4-202ENST00000390009 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
ACTN4-202ENST00000390009 DBF4Q9UBU7 674 aaPredicted RBP22.66■■□□□ 1.22
ACTN4-202ENST00000390009 ANXA1P04083 346 aa22.64■■□□□ 1.22
ACTN4-202ENST00000390009 MFAP1P55081 439 aaKnown RBP22.64■■□□□ 1.22
ACTN4-202ENST00000390009 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.22
ACTN4-202ENST00000390009 USP44Q9H0E7 712 aa22.64■■□□□ 1.21
ACTN4-202ENST00000390009 PARP4Q9UKK3 1724 aaKnown RBP22.63■■□□□ 1.21
ACTN4-202ENST00000390009 WDR17Q8IZU2 1322 aa22.63■■□□□ 1.21
ACTN4-202ENST00000390009 PRAMEF22A3QJZ6 481 aa22.63■■□□□ 1.21
ACTN4-202ENST00000390009 CYP27B1O15528 508 aa22.63■■□□□ 1.21
ACTN4-202ENST00000390009 SRCIN1Q9C0H9 1055 aa22.63■■□□□ 1.21
ACTN4-202ENST00000390009 PI4KAP2A4QPH2 592 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 ZNF790Q6PG37 636 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 PI4KAP1Q8N8J0 262 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 DNAAF4Q8WXU2 420 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 MRC1P22897 1456 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 C5P01031 1676 aa22.62■■□□□ 1.21
ACTN4-202ENST00000390009 APBB1O00213 710 aa22.61■■□□□ 1.21
ACTN4-202ENST00000390009 C16orf71Q8IYS4 520 aaPredicted RBP22.61■■□□□ 1.21
ACTN4-202ENST00000390009 NFATC2IPQ8NCF5 419 aa22.61■■□□□ 1.21
ACTN4-202ENST00000390009 DCAF5Q96JK2 942 aa22.61■■□□□ 1.21
ACTN4-202ENST00000390009 LRRFIP2Q9Y608 721 aaKnown RBP22.61■■□□□ 1.21
ACTN4-202ENST00000390009 COL5A2P05997 1499 aaPredicted RBP22.61■■□□□ 1.21
ACTN4-202ENST00000390009 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
ACTN4-202ENST00000390009 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
ACTN4-202ENST00000390009 ADCY9O60503 1353 aa22.61■■□□□ 1.21
ACTN4-202ENST00000390009 SMARCA5O60264 1052 aaPredicted RBP22.6■■□□□ 1.21
ACTN4-202ENST00000390009 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
ACTN4-202ENST00000390009 C22orf23Q9BZE7 217 aa22.6■■□□□ 1.21
ACTN4-202ENST00000390009 PNMA6EA0A0J9YXQ4 647 aa22.59■■□□□ 1.21
ACTN4-202ENST00000390009 PROSER3Q2NL68 480 aa22.59■■□□□ 1.21
ACTN4-202ENST00000390009 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
ACTN4-202ENST00000390009 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
ACTN4-202ENST00000390009 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.21
ACTN4-202ENST00000390009 GSPT1P15170 499 aaKnown RBP22.58■■□□□ 1.21
ACTN4-202ENST00000390009 OTUD7AQ8TE49 926 aaPredicted RBP22.58■■□□□ 1.2
ACTN4-202ENST00000390009 NBR1Q14596 966 aa22.57■■□□□ 1.2
ACTN4-202ENST00000390009 TTC22Q5TAA0 569 aa22.57■■□□□ 1.2
ACTN4-202ENST00000390009 HYPKQ9NX55 129 aa22.57■■□□□ 1.2
ACTN4-202ENST00000390009 EXOC6BQ9Y2D4 811 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms